MirGeneDB 3.0
MirGeneDB ID

Ofu-Mir-10-P5

Family name MIR-10 (all species)
Seed UACCCUG
Species Tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues Ofu-Mir-10-P1  Ofu-Mir-10-P2  Ofu-Mir-10-P3  Ofu-Mir-10-P4  Ofu-Mir-10-P6  Ofu-Mir-10-P7 
Orthologues Adi-Mir-10  Agr-Mir-10-P5  Asp-Mir-10  Cte-Mir-10-P5  Eba-Mir-10-P5  Efe-Mir-10-P5a  Efe-Mir-10-P5b  Hru-Mir-10-P5  Lgi-Mir-10-P5  Lhy-Mir-10-P5  Llo-Mir-10-P5a-v1  Llo-Mir-10-P5a-v2  Llo-Mir-10-P5b-v1  Llo-Mir-10-P5b-v2  Llo-Mir-10-P5b-v3  Mgi-Mir-10-P5  Mom-Mir-10-P5  Nve-Mir-10  Pau-Mir-10-P5  Pdu-Mir-10-P5  Pve-Mir-10-P5  Rph-Mir-10-P5  Snu-Mir-10-P5  War-Mir-10-P5 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Eumetazoa
Genome context
(GCA_903813345.2_Owenia)		 CAIIXF020000001.1: 18062015-18062073 [+]
Precursor
(pre-Mir +30nt flank)
GGAUCGGUGAUCGUACUAAAUGGACUAUGUUUACCCUGUAGAACCGAGCGAGUGUAUAACCUUGUCACCACUCGUUUCUCGGGGUACUUGUAUUCUAUUCAUAGCAACAAAGAUAGAUC
Get precursor sequence
Structure
        10          20        30        40        50        60 
GGAUCGGUGAUCGUACUA--|     C    UU       U    CCGA      GUAUAAC 
                    AAUGGA UAUG  UACCCUG AGAA    GCGAGU       C
                    UUAUCU AUGU  AUGGGGC UCUU    UGCUCA       U
CUAGAUAGAAACAACGAUAC^     U    UC       -    ----      CCACUGU 
       110       100        90        80             70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ow Ow
Mature sequence

Ofu-Mir-10-P5_5p
mirBase accessionNone
Sequence 
0- UUACCCUGUAGAACCGAGCGAGU -23
Get sequence
Star sequence

Ofu-Mir-10-P5_3p*
mirBase accessionNone
Sequence 
37- CCACUCGUUUCUCGGGGUACUU -59
Get sequence