MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-10-P5a-v1

Family name MIR-10 (all species)
Seed UACCCUG
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues Llo-Mir-10-P1  Llo-Mir-10-P2  Llo-Mir-10-P3  Llo-Mir-10-P4-v1  Llo-Mir-10-P4-v2  Llo-Mir-10-P5a-v2  Llo-Mir-10-P5b-v1  Llo-Mir-10-P5b-v2  Llo-Mir-10-P5b-v3 
Orthologues Adi-Mir-10  Agr-Mir-10-P5  Asp-Mir-10  Cte-Mir-10-P5  Eba-Mir-10-P5  Efe-Mir-10-P5a  Hru-Mir-10-P5  Lgi-Mir-10-P5  Lhy-Mir-10-P5  Mgi-Mir-10-P5  Mom-Mir-10-P5  Nve-Mir-10  Ofu-Mir-10-P5  Pau-Mir-10-P5  Pdu-Mir-10-P5  Pve-Mir-10-P5  Rph-Mir-10-P5  Snu-Mir-10-P5  War-Mir-10-P5 
Node of Origin (locus) Lineidae
Node of Origin (family) Eumetazoa
Genome context
(GCA_910592395.2_tnLinLong1)		 OU343004.1: 3860985-3861042 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CGCAUUCCAGUUUAGAUCGAUAGACUGCCUAUACCCUGUAGAACCGAGCGAGUGAUAAACUGACCACCACUCGUUUCUCAGGGUACAUGUAAGCUGUUGAACACAUCAUUACCACAGA
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Structure
        10          20        30        40        50        60 
CGCAUUCCAGUUUAGAU--|     AC   CUA       U    CCGA      GAUAAAC 
                   CGAUAG  UGC   UACCCUG AGAA    GCGAGU       \
                   GUUGUC  AUG   AUGGGAC UCUU    UGCUCA       U
AGACACCAUUACUACACAA^     GA   UAC       -    ----      CCACCAG 
      110       100        90        80             70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sr Sr Sr Sr Sr Sr
Mature sequence

Llo-Mir-10-P5a-v1_5p
mirBase accessionNone
Sequence 
0- AUACCCUGUAGAACCGAGCGAGU -23
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Star sequence

Llo-Mir-10-P5a-v1_3p*
mirBase accessionNone
Sequence 
36- CCACUCGUUUCUCAGGGUACAU -58
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