MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-10-P5a

Family name MIR-10 (all species)
Seed UACCCUG
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-10-P1  Efe-Mir-10-P2g  Efe-Mir-10-P2h  Efe-Mir-10-P2i  Efe-Mir-10-P2j  Efe-Mir-10-P2k  Efe-Mir-10-P3g  Efe-Mir-10-P3h  Efe-Mir-10-P3i  Efe-Mir-10-P4a  Efe-Mir-10-P4b  Efe-Mir-10-P4c  Efe-Mir-10-P5b  Efe-Mir-10-P6  Efe-Mir-10-P7a  Efe-Mir-10-P7b 
Orthologues Adi-Mir-10  Agr-Mir-10-P5  Asp-Mir-10  Cte-Mir-10-P5  Eba-Mir-10-P5  Hru-Mir-10-P5  Lgi-Mir-10-P5  Lhy-Mir-10-P5  Llo-Mir-10-P5a-v1  Llo-Mir-10-P5a-v2  Mgi-Mir-10-P5  Mom-Mir-10-P5  Nve-Mir-10  Ofu-Mir-10-P5  Pau-Mir-10-P5  Pdu-Mir-10-P5  Pve-Mir-10-P5  Rph-Mir-10-P5  Snu-Mir-10-P5  War-Mir-10-P5 
Node of Origin (locus) E. fetida
Node of Origin (family) Eumetazoa
Genome context
(Efe_combined)		 Efet.01.220021: 970-1033 [+]
Precursor
(pre-Mir +30nt flank)
GAGACUUCUGAGAACUGGUUUAGAAUGCCUUUACCCUGAAAAACCGAGUUUGUGUCACGUGUUCAAUAAACACAGCUCAGUGUUCAGGGUCAUUGGAUUCUAUGUUGGCUGCUCUCUGUGUCUC
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Structure
        10        20          30         40        50         60 
GAGACUUCUGAGAACUGGUU--|     G  UUU-        AA  C     -   GUCACGU 
                      UAGAAU CC    ACCCUGAA  AC GAGUU UGU       G
                      AUCUUA GG    UGGGACUU  UG CUCGA ACA       U
CUCUGUGUCUCUCGUCGGUUGU^     -  UUAC        G-  A     C   AAUAACU 
  120       110       100         90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Efe-Mir-10-P5a_5p
mirBase accessionNone
Sequence 
0- UUACCCUGAAAAACCGAGUUUGU -23
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Star sequence

Efe-Mir-10-P5a_3p*
mirBase accessionNone
Sequence 
42- CAGCUCAGUGUUCAGGGUCAUU -64
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