MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-10-P6

Family name MIR-10 (all species)
Seed UACCCUG
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-10-P1  Efe-Mir-10-P2g  Efe-Mir-10-P2h  Efe-Mir-10-P2i  Efe-Mir-10-P2j  Efe-Mir-10-P2k  Efe-Mir-10-P3g  Efe-Mir-10-P3h  Efe-Mir-10-P3i  Efe-Mir-10-P4a  Efe-Mir-10-P4b  Efe-Mir-10-P4c  Efe-Mir-10-P5a  Efe-Mir-10-P5b  Efe-Mir-10-P7a  Efe-Mir-10-P7b 
Orthologues Adi-Mir-10  Agr-Mir-10-P6  Asp-Mir-10  Cte-Mir-10-P6  Eba-Mir-10-P6  Esc-Mir-10-P6  Hru-Mir-10-P6  Lgi-Mir-10-P6  Lhy-Mir-10-P6  Mgi-Mir-10-P6  Mom-Mir-10-P6  Npo-Mir-10-P6  Nve-Mir-10  Obi-Mir-10-P6  Ofu-Mir-10-P6  Ovu-Mir-10-P6  Pve-Mir-10-P6  Rph-Mir-10-P6  War-Mir-10-P6 
Node of Origin (locus) Neotrochozoa
Node of Origin (family) Eumetazoa
Genome context
(Efe_combined)		 Efet.01.47127: 2521-2581 [-]
Precursor
(pre-Mir +30nt flank)
UGGGUUGAGGGGAUGGCGUGUUCGUCUGUUAUACCCUGUGAGUAGGGAACGUUUUGUUCGCCUAACAGCGAUCUCUAUUCGCUGGGUAAUACAGUCGAACUCGCGACGACUUCAAGAAUGA
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Structure
        10          20        30        40        50          
UGGGUUGAGGGGAUGGC--|U     U    UA     U           A   UUUGUUC 
                   G GUUCG CUGU  UACCC GUGAGUAGGGA CGU       \
                   C CAAGC GACA  AUGGG CGCUUAUCUCU GCG       G
AGUAAGAACUUCAGCAGCG^U     U    UA     U           A   ACAAUCC 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Efe-Mir-10-P6_5p
mirBase accessionNone
Sequence 
0- AUACCCUGUGAGUAGGGAACGU -22
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Star sequence

Efe-Mir-10-P6_3p*
mirBase accessionNone
Sequence 
39- GAUCUCUAUUCGCUGGGUAAUA -61
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