MirGeneDB 3.0

MirGeneDB ID

Obi-Mir-10-P6

Family name MIR-10 (all species)
Seed UUACCCU
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues Obi-Mir-10-P2  Obi-Mir-10-P3 
Orthologues Adi-Mir-10  Agr-Mir-10-P6  Asp-Mir-10  Cte-Mir-10-P6  Eba-Mir-10-P6  Efe-Mir-10-P6  Esc-Mir-10-P6  Hru-Mir-10-P6  Lgi-Mir-10-P6  Lhy-Mir-10-P6  Mgi-Mir-10-P6  Mom-Mir-10-P6  Npo-Mir-10-P6  Nve-Mir-10  Ofu-Mir-10-P6  Ovu-Mir-10-P6  Pve-Mir-10-P6  Rph-Mir-10-P6  War-Mir-10-P6 
Node of Origin (locus) Neotrochozoa
Node of Origin (family) Eumetazoa
Genome context
(PRJNA270931_OBI)
KQ421072: 14768-14828 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACCUCACGCGGACAUAUGUUGAAGGAUUAACUUACCCUGUCAAUCGGAGAAGUUUAUAUUCAACUUUGCUUCUCGUUUCACAGGGUAUAUUCAUCUUUUGGCAAAAAACAGCAUAGUAUUG
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Structure
        10          20        30        40        50        60
ACCUCACGCGGACAUAU--| UG      U  CU        C  UCG       UUAUAU 
                   GU  AAGGAU AA  UACCCUGU AA   GAGAAGU      U
                   CG  UUUCUA UU  AUGGGACA UU   CUCUUCG      C
GUUAUGAUACGACAAAAAA^ GU      C  AU        C  UG-       UUUCAA 
 .       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Obi-Mir-10-P6_5p (predicted)

mirBase accessionNone
Sequence
0- CUUACCCUGUCAAUCGGAGAAGU -23
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Star sequence

Obi-Mir-10-P6_3p* (predicted)

mirBase accessionNone
Sequence
39- UUCUCGUUUCACAGGGUAUAUU -61
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