MirGeneDB 3.0
MirGeneDB ID

Cte-Mir-10-P6

Family name MIR-10 (all species)
Seed UACCCUG
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-1991
Paralogues Cte-Mir-10-P1  Cte-Mir-10-P2  Cte-Mir-10-P3  Cte-Mir-10-P4  Cte-Mir-10-P5  Cte-Mir-10-P7  Cte-Mir-10-P7-as  Cte-Mir-10-P8 
Orthologues Adi-Mir-10  Agr-Mir-10-P6  Asp-Mir-10  Eba-Mir-10-P6  Efe-Mir-10-P6  Esc-Mir-10-P6  Hru-Mir-10-P6  Lgi-Mir-10-P6  Lhy-Mir-10-P6  Mgi-Mir-10-P6  Mom-Mir-10-P6  Npo-Mir-10-P6  Nve-Mir-10  Obi-Mir-10-P6  Ofu-Mir-10-P6  Ovu-Mir-10-P6  Pve-Mir-10-P6  Rph-Mir-10-P6  War-Mir-10-P6 
Node of Origin (locus) Neotrochozoa
Node of Origin (family) Eumetazoa
Genome context
(Capitella_teleta_v1.0)		 CAPTEscaffold_292: 57243-57305 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAACUGCUGACAAUCCUCGCCAUCAAUUCUUUACCCUGUUACAUUGUAGAAUGCUUGUUAUUCCUUUGUAUUCUCAAUGUACAAGGUAUUAAGAAUUGGAGGUUGAAUUACUUCCGGAAGUCA
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Structure
        10          20        30          40        50        60 
AAACUGCUGACAAUCCUC--   AU        --|   C   U      U       UUGUUA 
                    GCC  CAAUUCUU  UACC UGU ACAUUG AGAAUGC      \
                    UGG  GUUAAGAA  AUGG ACA UGUAAC UCUUAUG      U
ACUGAAGGCCUUCAUUAAGU   AG        UU^   A   -      -       UUUCCU 
 120       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ea Fe Fe La La Ma Ma To
Mature sequence

Cte-Mir-10-P6_5p
mirBase accessionMIMAT0013551
Sequence 
0- UUACCCUGUUACAUUGUAGAAUGC -24
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Star sequence

Cte-Mir-10-P6_3p*
mirBase accessionNone
Sequence 
39- AUUCUCAAUGUACAAGGUAUUAAG -63
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