MirGeneDB 3.0
MirGeneDB ID

Cte-Mir-10-P5

Family name MIR-10 (all species)
Seed UACCCUG
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-10b
Paralogues Cte-Mir-10-P1  Cte-Mir-10-P2  Cte-Mir-10-P3  Cte-Mir-10-P4  Cte-Mir-10-P6  Cte-Mir-10-P7  Cte-Mir-10-P7-as  Cte-Mir-10-P8 
Orthologues Adi-Mir-10  Agr-Mir-10-P5  Asp-Mir-10  Eba-Mir-10-P5  Efe-Mir-10-P5a  Efe-Mir-10-P5b  Hru-Mir-10-P5  Lgi-Mir-10-P5  Lhy-Mir-10-P5  Llo-Mir-10-P5a-v1  Llo-Mir-10-P5a-v2  Llo-Mir-10-P5b-v1  Llo-Mir-10-P5b-v2  Llo-Mir-10-P5b-v3  Mgi-Mir-10-P5  Mom-Mir-10-P5  Nve-Mir-10  Ofu-Mir-10-P5  Pau-Mir-10-P5  Pdu-Mir-10-P5  Pve-Mir-10-P5  Rph-Mir-10-P5  Snu-Mir-10-P5  War-Mir-10-P5 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Eumetazoa
Genome context
(Capitella_teleta_v1.0)		 CAPTEscaffold_70: 411688-411746 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUCUACCUUCAAUUAUUGGUAACGUUGCCCUUACCCUGUCGAACCGAGCGAGUGAGAAAUUUACCCACCCCUCAGUUUGCAGGGUACAAGCAACUUGCUAUUUCUCACCACGGUAUGCA
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Structure
        10           20        30        40        50          
UUCUACCUUCAAUUAUU---|    C     CCU       U     C   CGA   AGAAA 
                    GGUAA GUUGC   UACCCUG CGAAC GAG   GUG     \
                    UCGUU CAACG   AUGGGAC GUUUG CUC   CAC     U
ACGUAUGGCACCACUCUUUA^    -     AAC       -     A   CC-   CCAUU 
       110       100         90        80         70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ea Fe Fe La La Ma Ma To
Mature sequence

Cte-Mir-10-P5_5p
mirBase accessionMIMAT0009510
Sequence 
0- UUACCCUGUCGAACCGAGCGAGUG -24
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Star sequence

Cte-Mir-10-P5_3p* (predicted)
mirBase accessionNone
Sequence 
37- CCCCUCAGUUUGCAGGGUACAA -59
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