MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-10-P5b-v1

Family name MIR-10 (all species)
Seed ACCCUGU
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues Llo-Mir-10-P1  Llo-Mir-10-P2  Llo-Mir-10-P3  Llo-Mir-10-P4-v1  Llo-Mir-10-P4-v2  Llo-Mir-10-P5a-v1  Llo-Mir-10-P5a-v2  Llo-Mir-10-P5b-v2  Llo-Mir-10-P5b-v3 
Orthologues Adi-Mir-10  Agr-Mir-10-P5  Asp-Mir-10  Cte-Mir-10-P5  Eba-Mir-10-P5  Efe-Mir-10-P5b  Hru-Mir-10-P5  Lgi-Mir-10-P5  Lhy-Mir-10-P5  Mgi-Mir-10-P5  Mom-Mir-10-P5  Nve-Mir-10  Ofu-Mir-10-P5  Pau-Mir-10-P5  Pdu-Mir-10-P5  Pve-Mir-10-P5  Rph-Mir-10-P5  Snu-Mir-10-P5  War-Mir-10-P5 
Node of Origin (locus) Lineidae
Node of Origin (family) Eumetazoa
Genome context
(GCA_910592395.2_tnLinLong1)		 OU343004.1: 3931990-3932051 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AGCAUGGUCAAAAUGUGGCGAGUUUCUGUGUACCCUGUAGAACCGAGCUAGUGUAUUUAGUUAGAAACUCACAAGCCAUUCUACAGUGUACAAAGAAACGUCUCGCUUCUAUCAACACCCUG
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Structure
        10         20         30        40        50        60 
AGCAUGGUCAAAAUGUGGC-  -|     G     C        CCGA   A   UAUUUAG 
                    GA GUUUCU UGUAC CUGUAGAA    GCU GUG       U
                    CU CAAAGA ACAUG GACAUCUU    CGA CAC       U
GUCCCACAACUAUCUUCGCU  G^     A     U        AC--   A   UCAAAGA 
120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Sr Sr Sr Sr Sr Sr
Mature sequence

Llo-Mir-10-P5b-v1_5p
mirBase accessionNone
Sequence 
0- UACCCUGUAGAACCGAGCUAGUG -23
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Star sequence

Llo-Mir-10-P5b-v1_3p*
mirBase accessionNone
Sequence 
41- CAAGCCAUUCUACAGUGUACA -62
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