MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-10-P5b

Family name MIR-10 (all species)
Seed UACCCUG
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-10-P1  Efe-Mir-10-P2g  Efe-Mir-10-P2h  Efe-Mir-10-P2i  Efe-Mir-10-P2j  Efe-Mir-10-P2k  Efe-Mir-10-P3g  Efe-Mir-10-P3h  Efe-Mir-10-P3i  Efe-Mir-10-P4a  Efe-Mir-10-P4b  Efe-Mir-10-P4c  Efe-Mir-10-P5a  Efe-Mir-10-P6  Efe-Mir-10-P7a  Efe-Mir-10-P7b 
Orthologues Adi-Mir-10  Agr-Mir-10-P5  Asp-Mir-10  Cte-Mir-10-P5  Eba-Mir-10-P5  Hru-Mir-10-P5  Lgi-Mir-10-P5  Lhy-Mir-10-P5  Llo-Mir-10-P5b-v1  Llo-Mir-10-P5b-v2  Llo-Mir-10-P5b-v3  Mgi-Mir-10-P5  Mom-Mir-10-P5  Nve-Mir-10  Ofu-Mir-10-P5  Pau-Mir-10-P5  Pdu-Mir-10-P5  Pve-Mir-10-P5  Rph-Mir-10-P5  Snu-Mir-10-P5  War-Mir-10-P5 
Node of Origin (locus) E. fetida
Node of Origin (family) Eumetazoa
Genome context
(Efe_combined)		 Efet.01.592112: 1135-1197 [+]
Precursor
(pre-Mir +30nt flank)
GCAAGAGGGUAACAAUGGCGGUGGUUACGUUUACCCUGAAGAACCGGACAAGUGUAUUGCGUCAAUAAGCACGGGCCUUUCUUCAGAGUCAACGAAUUCAUCGUCUGUACACACGACAUGUUA
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Structure
        10          20        30        40        50        60  
GCAAGAGGGUAACAAUG--|      UUA    U  C        CC  ACAA    AUUGCG 
                   GCGGUGG   CGUU AC CUGAAGAA  GG    GUGU      \
                   UGCUACU   GCAA UG GACUUCUU  CC    CACG      U
AUUGUACAGCACACAUGUC^      UAA    C  A        U-  GGG-    AAUAAC 
 120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Efe-Mir-10-P5b_5p
mirBase accessionNone
Sequence 
0- UUACCCUGAAGAACCGGACAAGUGU -25
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Star sequence

Efe-Mir-10-P5b_3p*
mirBase accessionNone
Sequence 
40- ACGGGCCUUUCUUCAGAGUCAAC -63
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