MirGeneDB 3.0
MirGeneDB ID

Pau-Mir-10-P5

Family name MIR-10 (all species)
Seed UACCCUG
Species Horseshoe worm (Phoronis australis)
MiRBase ID
Paralogues Pau-Mir-10-P1  Pau-Mir-10-P2  Pau-Mir-10-P3 
Orthologues Adi-Mir-10  Agr-Mir-10-P5  Asp-Mir-10  Cte-Mir-10-P5  Eba-Mir-10-P5  Efe-Mir-10-P5a  Efe-Mir-10-P5b  Hru-Mir-10-P5  Lgi-Mir-10-P5  Lhy-Mir-10-P5  Llo-Mir-10-P5a-v1  Llo-Mir-10-P5a-v2  Llo-Mir-10-P5b-v1  Llo-Mir-10-P5b-v2  Llo-Mir-10-P5b-v3  Mgi-Mir-10-P5  Mom-Mir-10-P5  Nve-Mir-10  Ofu-Mir-10-P5  Pdu-Mir-10-P5  Pve-Mir-10-P5  Rph-Mir-10-P5  Snu-Mir-10-P5  War-Mir-10-P5 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Eumetazoa
Genome context
(Phoronis_australis_GCA_002633005)		 NMRA01000084.1: 489056-489115 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UAUCAAAAGACUGAGCAAGUUUGCGCGUAUAUACCCUGACAGACCGAGUGUGUGUUCAAAACUAUUCACCUCUCGUUCGUCAGGGUACAUUCGUUCUUGCUAUAGCGUCCAAGCCAUUGC
Get precursor sequence
Structure
        10          20        30        40         50         
UAUCAAAAGACUGAGCA--|  UUGC   U  A         A  C    U-   UGUUCA 
                   AGU    GCG AU UACCCUGAC GA CGAG  GUG      A
                   UCG    UGC UA AUGGGACUG CU GCUC  CAC      A
CGUUACCGAACCUGCGAUA^  UUCU   U  C         -  U    UC   UUAUCA 
.       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Pau-Mir-10-P5_5p
mirBase accessionNone
Sequence 
0- AUACCCUGACAGACCGAGUGUGUG -24
Get sequence
Star sequence

Pau-Mir-10-P5_3p* (predicted)
mirBase accessionNone
Sequence 
38- CCUCUCGUUCGUCAGGGUACAU -60
Get sequence