MirGeneDB ID | Mom-Mir-10-P5 |
Family name |
MIR-10 (all species) |
Seed |
UACCCUG |
Species |
Mossy chiton (Mopalia muscosa) |
MiRBase ID |
|
Paralogues |
Mom-Mir-10-P1
Mom-Mir-10-P2
Mom-Mir-10-P3
Mom-Mir-10-P6
|
Orthologues |
Adi-Mir-10
Agr-Mir-10-P5
Asp-Mir-10
Cte-Mir-10-P5
Eba-Mir-10-P5
Efe-Mir-10-P5a
Efe-Mir-10-P5b
Hru-Mir-10-P5
Lgi-Mir-10-P5
Lhy-Mir-10-P5
Llo-Mir-10-P5a-v1
Llo-Mir-10-P5a-v2
Llo-Mir-10-P5b-v1
Llo-Mir-10-P5b-v2
Llo-Mir-10-P5b-v3
Mgi-Mir-10-P5
Nve-Mir-10
Ofu-Mir-10-P5
Pau-Mir-10-P5
Pdu-Mir-10-P5
Pve-Mir-10-P5
Rph-Mir-10-P5
Snu-Mir-10-P5
War-Mir-10-P5
|
Node of Origin (locus) |
Lophotrochozoa
|
Node of Origin (family) |
Eumetazoa
|
Genome context (GCA_031763545.1_ASM3176354v1_genomic_Mom) |
JARFOD010000020.1: 775225-775287 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUGAGUGUCUGUACUUUGGGUUGGUUGUUUUUACCCUGUAGAACCGAGCGAGUGUGACAGUUAAACCAACACUGUUCGGUUCUGAGGGUUGACAUUAUCAGCUUACUUUCAACACAACGAAAG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UUGAGUGUCUGUACUUU-- --| UUU G G UGACAGU
GGGUUGGU UGUU ACCCU UAGAACCGAGC AGUG \
UUCGACUA ACAG UGGGA GUCUUGGCUUG UCAC U
GAAAGCAACACAACUUUCA UU^ U-- - - AACCAAA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Mom-Mir-10-P5_5p |
mirBase accession | None |
Sequence |
0- UUACCCUGUAGAACCGAGCGAGUG -24
Get sequence
|
Star sequence |
Mom-Mir-10-P5_3p* |
mirBase accession | None |
Sequence |
41- CUGUUCGGUUCUGAGGGUUGAC -63
Get sequence
|