MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-10-P5b-v2

Family name MIR-10 (all species)
Seed UACCCUG
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues Llo-Mir-10-P1  Llo-Mir-10-P2  Llo-Mir-10-P3  Llo-Mir-10-P4-v1  Llo-Mir-10-P4-v2  Llo-Mir-10-P5a-v1  Llo-Mir-10-P5a-v2  Llo-Mir-10-P5b-v1  Llo-Mir-10-P5b-v3 
Orthologues Adi-Mir-10  Agr-Mir-10-P5  Asp-Mir-10  Cte-Mir-10-P5  Eba-Mir-10-P5  Efe-Mir-10-P5b  Hru-Mir-10-P5  Lgi-Mir-10-P5  Lhy-Mir-10-P5  Mgi-Mir-10-P5  Mom-Mir-10-P5  Nve-Mir-10  Ofu-Mir-10-P5  Pau-Mir-10-P5  Pdu-Mir-10-P5  Pve-Mir-10-P5  Rph-Mir-10-P5  Snu-Mir-10-P5  War-Mir-10-P5 
Node of Origin (locus) Lineidae
Node of Origin (family) Eumetazoa
Genome context
(GCA_910592395.2_tnLinLong1)		 OU343004.1: 3931989-3932052 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCAUGGUCAAAAUGUGGCGAGUUUCUGUGUACCCUGUAGAACCGAGCUAGUGUAUUUAGUUAGAAACUCACAAGCCAUUCUACAGUGUACAAAGAAACGUCUCGCUUCUAUCAACACCCUGA
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Structure
        10            20        30        40        50        60  
CAGCAUGGUCAAAAUGU----|  GA      G     C        CCGA   A  GUAUUUAG 
                     GGC  GUUUCU UGUAC CUGUAGAA    GCU GU        U
                     CUG  CAAAGA ACAUG GACAUCUU    CGA CA        U
AGUCCCACAACUAUCUUCGCU^  --      A     U        AC--   A  CUCAAAGA 
  120       110         100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Sr Sr Sr Sr Sr Sr
Mature sequence

Llo-Mir-10-P5b-v2_5p
mirBase accessionNone
Sequence 
0- GUACCCUGUAGAACCGAGCUAGU -23
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Star sequence

Llo-Mir-10-P5b-v2_3p*
mirBase accessionNone
Sequence 
43- AAGCCAUUCUACAGUGUACAA -64
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