MirGeneDB 3.0
MirGeneDB ID

Agr-Mir-10-P5

Family name MIR-10 (all species)
Seed UACCCUG
Species West Indian fuzzy chiton (Acanthopleura granulata )
MiRBase ID
Paralogues Agr-Mir-10-P1  Agr-Mir-10-P2  Agr-Mir-10-P3  Agr-Mir-10-P6 
Orthologues Adi-Mir-10  Asp-Mir-10  Cte-Mir-10-P5  Eba-Mir-10-P5  Efe-Mir-10-P5a  Efe-Mir-10-P5b  Hru-Mir-10-P5  Lgi-Mir-10-P5  Lhy-Mir-10-P5  Llo-Mir-10-P5a-v1  Llo-Mir-10-P5a-v2  Llo-Mir-10-P5b-v1  Llo-Mir-10-P5b-v2  Llo-Mir-10-P5b-v3  Mgi-Mir-10-P5  Mom-Mir-10-P5  Nve-Mir-10  Ofu-Mir-10-P5  Pau-Mir-10-P5  Pdu-Mir-10-P5  Pve-Mir-10-P5  Rph-Mir-10-P5  Snu-Mir-10-P5  War-Mir-10-P5 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Eumetazoa
Genome context
(GCA_016165875.1_ASM1616587v1_Acanthopleura_granula)		 JABBOT010000003.1: 19720884-19720942 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUUAAGAGUGACCUAUAUGGUUGGUUGUUUUUACCCUGUAGAACCGAGCGAGUGUUUUGGAGUCUCACUGUUCGCUUCUCGGGGUUGACAUGACCAGCUUAAAAUCAACAUCACCACAG
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Structure
        10          20        30        40        50          
GUUAAGAGUGACCUAUAU--|      UG U  U      U    C     G    UUUUG 
                    GGUUGGU  U UU ACCCUG AGAA CGAGC AGUG     \
                    UCGACCA  A AG UGGGGC UCUU GCUUG UCAC     G
GACACCACUACAACUAAAAU^      GU C  U      -    C     -    UCUGA 
       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Le
Mature sequence

Agr-Mir-10-P5_5p
mirBase accessionNone
Sequence 
0- UUACCCUGUAGAACCGAGCGAGUG -24
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Star sequence

Agr-Mir-10-P5_3p* (predicted)
mirBase accessionNone
Sequence 
37- CUGUUCGCUUCUCGGGGUUGAC -59
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