MirGeneDB 3.0
MirGeneDB ID

Lhy-Mir-10-P5

Family name MIR-10 (all species)
Seed UACCCUG
Species Laevipilina (Monoplacophora) (Laevipilina hyalina)
MiRBase ID
Paralogues Lhy-Mir-10-P1  Lhy-Mir-10-P2  Lhy-Mir-10-P3  Lhy-Mir-10-P6 
Orthologues Adi-Mir-10  Agr-Mir-10-P5  Asp-Mir-10  Cte-Mir-10-P5  Eba-Mir-10-P5  Efe-Mir-10-P5a  Efe-Mir-10-P5b  Hru-Mir-10-P5  Lgi-Mir-10-P5  Llo-Mir-10-P5a-v1  Llo-Mir-10-P5a-v2  Llo-Mir-10-P5b-v1  Llo-Mir-10-P5b-v2  Llo-Mir-10-P5b-v3  Mgi-Mir-10-P5  Mom-Mir-10-P5  Nve-Mir-10  Ofu-Mir-10-P5  Pau-Mir-10-P5  Pdu-Mir-10-P5  Pve-Mir-10-P5  Rph-Mir-10-P5  Snu-Mir-10-P5  War-Mir-10-P5 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Eumetazoa
Genome context
(Mono_atcgn_nospaces)		 scaffold128389_22.4: 1524-1582 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CGAGAAUACCGUCCUUUGUGCACGUCGCUUUUACCCUGUUGAACCGAGCGAGUGGAGGUAUAACACACUGUUCGAUUCUCGGGGUCAACGAGAUGUGUUCAGUUUCUUCGGGAUUUAUC
Get precursor sequence
Structure
        10          20        30        40        50          
CGAGAAUACCGUCCUUU--|U       GCUUUU      UU   C     G   GGAGGU 
                   G GCACGUC      ACCCUG  GAA CGAGC AGU      \
                   C UGUGUAG      UGGGGC  CUU GCUUG UCA      A
CUAUUUAGGGCUUCUUUGA^U       AGCAAC      U-   A     -   CACAAU 
       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Lhy-Mir-10-P5_5p
mirBase accessionNone
Sequence 
0- UUACCCUGUUGAACCGAGCGAGU -23
Get sequence
Star sequence

Lhy-Mir-10-P5_3p*
mirBase accessionNone
Sequence 
37- CUGUUCGAUUCUCGGGGUCAAC -59
Get sequence