MirGeneDB 3.0
MirGeneDB ID

Lhy-Mir-10-P6

Family name MIR-10 (all species)
Seed UUACCCU
Species Laevipilina (Monoplacophora) (Laevipilina hyalina)
MiRBase ID
Paralogues Lhy-Mir-10-P1  Lhy-Mir-10-P2  Lhy-Mir-10-P3  Lhy-Mir-10-P5 
Orthologues Adi-Mir-10  Agr-Mir-10-P6  Asp-Mir-10  Cte-Mir-10-P6  Eba-Mir-10-P6  Efe-Mir-10-P6  Esc-Mir-10-P6  Hru-Mir-10-P6  Lgi-Mir-10-P6  Mgi-Mir-10-P6  Mom-Mir-10-P6  Npo-Mir-10-P6  Nve-Mir-10  Obi-Mir-10-P6  Ofu-Mir-10-P6  Ovu-Mir-10-P6  Pve-Mir-10-P6  Rph-Mir-10-P6  War-Mir-10-P6 
Node of Origin (locus) Neotrochozoa
Node of Origin (family) Eumetazoa
Genome context
(Mono_atcgn_nospaces)		 scaffold30956_28.1: 8127-8184 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAACCGGAAGUGAACAGCCUUCUGGGUAACCUUACCCUACAUAUCGGAGAAGUGAAUUUCAACUACUUCUCGUUAUAUAGGGUAUAUUUACCAGGCGGCUCAGUCAUCAAAUAUUAGU
Get precursor sequence
Structure
        10           20        30        40        50         
GAACCGGAAGUGAACAG---| U     G   CCU       C   UCG       GAAUU 
                    CC UCUGG UAA   UACCCUA AUA   GAGAAGU     \
                    GG GGACC AUU   AUGGGAU UAU   CUCUUCA     U
UGAUUAUAAACUACUGACUC^ C     -   UAU       A   UG-       UCAAC 
      110       100         90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Lhy-Mir-10-P6_5p
mirBase accessionNone
Sequence 
0- CUUACCCUACAUAUCGGAGAAGU -23
Get sequence
Star sequence

Lhy-Mir-10-P6_3p*
mirBase accessionNone
Sequence 
36- UUCUCGUUAUAUAGGGUAUAUU -58
Get sequence