MirGeneDB 3.0

MirGeneDB ID

War-Mir-10-P6

Family name MIR-10 (all species)
Seed UUACCCU
Species Wirenia (Solenogaster) (Wirenia argentea)
MiRBase ID
Paralogues War-Mir-10-P1  War-Mir-10-P2s  War-Mir-10-P2t  War-Mir-10-P3  War-Mir-10-P5 
Orthologues Adi-Mir-10  Agr-Mir-10-P6  Asp-Mir-10  Cte-Mir-10-P6  Eba-Mir-10-P6  Efe-Mir-10-P6  Esc-Mir-10-P6  Hru-Mir-10-P6  Lgi-Mir-10-P6  Lhy-Mir-10-P6  Mgi-Mir-10-P6  Mom-Mir-10-P6  Npo-Mir-10-P6  Nve-Mir-10  Obi-Mir-10-P6  Ofu-Mir-10-P6  Ovu-Mir-10-P6  Pve-Mir-10-P6  Rph-Mir-10-P6 
Node of Origin (locus) Neotrochozoa
Node of Origin (family) Eumetazoa
Genome context
(GCA_025802215.1_ASM2580221v1_Wirenia)
WNLI01106048.1: 3757-3815 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUCAGACCUACCAUGUGUCGUGCUGAGCCACUUACCCUGUCAAUCGGAGAAAGUGUUCCAGACCCACUUCUCGUUUUACAGGGUAUAUUGCUCGGCAUGAACCGCUUCAAAACACAGCA
Get precursor sequence
Structure
        10          20        30        40        50         
CUCAGACCUACCAUGUG--|          CACU        C  UCG     AGUGUUC 
                   UCGUGCUGAGC    UACCCUGU AA   GAGAA       C
                   AGUACGGCUCG    AUGGGACA UU   CUCUU       A
ACGACACAAAACUUCGCCA^          UUAU        U  UG-     CACCCAG 
       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
To
Mature sequence

War-Mir-10-P6_5p

mirBase accessionNone
Sequence
0- CUUACCCUGUCAAUCGGAGAAAG -23
Get sequence
Star sequence

War-Mir-10-P6_3p* (predicted)

mirBase accessionNone
Sequence
37- UUCUCGUUUUACAGGGUAUAUU -59
Get sequence