| MirGeneDB ID | Ovu-Mir-10-P6 |
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| Family name |
MIR-10 (all species) |
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| Seed |
UCUCGUU |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
Ovu-Mir-10-P2
Ovu-Mir-10-P3
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| Orthologues |
Cgi-Mir-10-P6
Cte-Mir-10-P6
Efe-Mir-10-P6
Esc-Mir-10-P6
Lgi-Mir-10-P6
Npo-Mir-10-P6
Nve-Mir-10
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| Node of Origin (locus) |
Lophotrochozoa
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| Node of Origin (family) |
Eumetazoa
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01017394.1: 10789-10849 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACCUCACGCAGACAUAUGCUGAAGGAUUAACUUACCCUGUCAAUCGGAGAAGUUUAUAUUCAACCUUGCUUCUCGUUUCACAGGGUAUAUUCAUCUUUUGGCAAAAAACAGCAUAGUACAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
ACCUCACGCAGACAUAU--| UG U CU C UCG UUAUAU
GC AAGGAU AA UACCCUGU AA GAGAAGU U
CG UUUCUA UU AUGGGACA UU CUCUUCG C
GACAUGAUACGACAAAAAA^ GU C AU C UG- UUCCAA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
Ne |
No |
No |
No |
No |
No |
No |
No |
No |
No |
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| Star sequence |
Ovu-Mir-10-P6_5p* |
| mirBase accession | None |
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| Sequence |
0- CUUACCCUGUCAAUCGGAGAAGU -23
Get sequence
|
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| Mature sequence |
Ovu-Mir-10-P6_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UUCUCGUUUCACAGGGUAUAUU -61
Get sequence
|
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