MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-10-P3g

Family name MIR-10 (all species)
Seed CCCUGAG
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-10-P1  Efe-Mir-10-P2g  Efe-Mir-10-P2h  Efe-Mir-10-P2i  Efe-Mir-10-P2j  Efe-Mir-10-P2k  Efe-Mir-10-P3h  Efe-Mir-10-P3i  Efe-Mir-10-P4a  Efe-Mir-10-P4b  Efe-Mir-10-P4c  Efe-Mir-10-P5a  Efe-Mir-10-P5b  Efe-Mir-10-P6  Efe-Mir-10-P7a  Efe-Mir-10-P7b 
Orthologues Aae-Mir-10-P3  Adi-Mir-10  Aga-Mir-10-P3  Agr-Mir-10-P3  Asp-Mir-10  Asu-Mir-10-P3  Bfl-Mir-10-P3  Bge-Mir-10-P3  Bko-Mir-10-P3  Bla-Mir-10-P3  Bpl-Mir-10-P3  Cin-Mir-10-P3  Cte-Mir-10-P3  Dan-Mir-10-P3  Dlo-Mir-10-P3  Dma-Mir-10-P3  Dme-Mir-10-P3  Dmo-Mir-10-P3  Dpu-Mir-10-P3  Dsi-Mir-10-P3  Dya-Mir-10-P3  Eba-Mir-10-P3  Egr-Mir-10-P3  Esc-Mir-10-P3  Gpa-Mir-10-P3  Gsa-Mir-10-P3  Gsp-Mir-10-P3  Hru-Mir-10-P3  Isc-Mir-10-P3  Lan-Mir-10-P3  Lgi-Mir-10-P3  Lhy-Mir-10-P3  Llo-Mir-10-P3  Mgi-Mir-10-P3  Mom-Mir-10-P3  Nag-Mir-10-P3-v1  Nag-Mir-10-P3-v2  Nve-Mir-10  Obi-Mir-10-P3  Ofu-Mir-10-P3  Ovu-Mir-10-P3  Pau-Mir-10-P3  Pca-Mir-10-P3  Pcr-Mir-10-P3  Pdu-Mir-10-P3  Ple-Mir-10-P3  Pmi-Mir-10-P3  Pve-Mir-10-P3  Rph-Mir-10-P3  Sko-Mir-10-P3  Snu-Mir-10-P3  Spu-Mir-10-P3  Tca-Mir-10-P3  War-Mir-10-P3  Xbo-Mir-10-P3 
Node of Origin (locus) E. fetida
Node of Origin (family) Eumetazoa
Genome context
(Efe_combined)		 Efet.01.31863: 2338-2394 [-]
Precursor
(pre-Mir +30nt flank)
UAGUUUGAUCUGCAUUCAUACAGUCCUCUUUCCCUGAGACCUUAACUUGUGGUGUCUUCAGGUCCACAAGUAAGGAUCUCAGGAGCCGAGUGCUGACCAGCCUUCAGCAAUCGUUUG
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Structure
        10        20          30         40        50        
UAGUUUGAUCUGCAUUCAUA--   UC   UUUC       -|    A       UGUCU 
                      CAG  CUC    CCUGAGA CCUUA CUUGUGG     \
                      GUC  GAG    GGACUCU GGAAU GAACACC     U
GUUUGCUAACGACUUCCGACCA   GU   CCGA       A^    -       UGGAC 
     110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Efe-Mir-10-P3g_5p
mirBase accessionNone
Sequence 
0- UCCCUGAGACCUUAACUUGUGG -22
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Star sequence

Efe-Mir-10-P3g_3p*
mirBase accessionNone
Sequence 
35- ACAAGUAAGGAUCUCAGGAGCC -57
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