MirGeneDB 3.0
127 Capitella teleta microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Ea Fe Fe La La Ma Ma To
Cte-Bantam cte-bantam BANTAM GAGAUCA None MIMAT0009551 CAPTEscaffold_114 319163 319225 + Protostomia Protostomia No
Cte-Let-7 cte-let-7 LET-7 GAGGUAG MIMAT0009552 None CAPTEscaffold_135 267314 267381 + Bilateria Bilateria No 1
Cte-Mir-1 cte-mir-1 MIR-1 GGAAUGU None MIMAT0009502 CAPTEscaffold_274 105952 106014 - Bilateria Bilateria No
Cte-Mir-2-o13 cte-mir-2b MIR-2 CACAGCC None MIMAT0009504 CAPTEscaffold_933 10046 10112 + C. teleta Protostomia No 1 1
Cte-Mir-2-o14 cte-mir-2c MIR-2 AUCACAG None MIMAT0009505 CAPTEscaffold_933 10412 10472 + C. teleta Protostomia No 1 1
Cte-Mir-2-o15 cte-mir-2a MIR-2 AUCACAG None MIMAT0009503 CAPTEscaffold_933 10541 10616 + C. teleta Protostomia No 1
Cte-Mir-2-o16 cte-mir-2d-1 MIR-2 AUCACAG None MIMAT0009678 CAPTEscaffold_876 29247 29305 - C. teleta Protostomia No 1
Cte-Mir-2-o17 cte-mir-2709 MIR-2 AUCACAG MIMAT0013578 None CAPTEscaffold_876 29085 29145 - C. teleta Protostomia No 1
Cte-Mir-2-o18 cte-mir-2f MIR-2 AUCACAG None MIMAT0013528 CAPTEscaffold_876 28955 29017 - C. teleta Protostomia No 1
Cte-Mir-2-o19 cte-mir-2e-1 MIR-2 AUCACAG None MIMAT0013527 CAPTEscaffold_36111 940 1000 + C. teleta Protostomia No 1
Cte-Mir-2-P12 cte-mir-2g MIR-2 AUCACAG None MIMAT0013559 CAPTEscaffold_933 10173 10226 + Lophotrochozoa Protostomia No 1
Cte-Mir-7 cte-mir-7 MIR-7 GGAAGAC MIMAT0009506 None CAPTEscaffold_85 61656 61717 + Bilateria Bilateria No 1
Cte-Mir-8 cte-mir-8 MIR-8 AAUACUG None MIMAT0009507 CAPTEscaffold_548 60524 60584 + Nephrozoa Nephrozoa No 1
Cte-Mir-9 cte-mir-9 MIR-9 CUUUGGU MIMAT0009508 MIMAT0009554 CAPTEscaffold_250 129678 129738 + Bilateria Bilateria Unknown 1
Cte-Mir-10-P1 cte-mir-10a MIR-10 ACCCUGU MIMAT0009509 None CAPTEscaffold_70 265131 265196 - Annelida Eumetazoa No 1
Cte-Mir-10-P2 cte-mir-100 MIR-10 ACCCGUA MIMAT0009524 None CAPTEscaffold_135 267093 267153 + Bilateria Eumetazoa Yes 1
Cte-Mir-10-P3 cte-mir-125 MIR-10 CCCUGAG MIMAT0009525 None CAPTEscaffold_135 290568 290628 + Bilateria Eumetazoa No 1
Cte-Mir-10-P4 cte-mir-993 MIR-10 GAAGCUC None MIMAT0013529 CAPTEscaffold_70 218590 218651 + Protostomia Eumetazoa No 1
Cte-Mir-10-P5 cte-mir-10b MIR-10 UACCCUG MIMAT0009510 None CAPTEscaffold_70 411688 411746 - Lophotrochozoa Eumetazoa Unknown 1 1
Cte-Mir-10-P6 cte-mir-1991 MIR-10 UACCCUG MIMAT0013551 None CAPTEscaffold_292 57243 57305 - Neotrochozoa Eumetazoa No 1
Cte-Mir-10-P7 cte-mir-10c MIR-10 ACCCUGU MIMAT0009511 None CAPTEscaffold_70 317880 317941 - Annelida Eumetazoa No 1
Cte-Mir-10-P7-as cte-mir-10c MIR-10 ACACUGU MIMAT0009511 None CAPTEscaffold_70 317882 317943 + C. teleta Eumetazoa No 1
Cte-Mir-10-P8 None MIR-10 ACCCUGU None None CAPTEscaffold_70 255158 255218 + Pleistoannelida Eumetazoa No 1
Cte-Mir-12 cte-mir-12 MIR-12 GAGUAUU MIMAT0009512 None CAPTEscaffold_192 33844 33902 - Protostomia Protostomia No 1 1
Cte-Mir-22-P1 cte-mir-745a MIR-22 GCUGCCU None MIMAT0009545 CAPTEscaffold_133 228398 228455 + Bilateria Bilateria No 1
Cte-Mir-22-P2 cte-mir-745b MIR-22 AGCUGCC None MIMAT0009546 CAPTEscaffold_133 228627 228683 + Bilateria Bilateria No 1
Cte-Mir-29-P1 cte-mir-29b MIR-29 AGCACCA None MIMAT0009514 CAPTEscaffold_794 7597 7665 - Bilateria Bilateria No 1 1
Cte-Mir-29-P2 cte-mir-29a MIR-29 AGCACCA None MIMAT0009513 CAPTEscaffold_794 6889 6954 - Bilateria Bilateria No 1 1
Cte-Mir-31 cte-mir-31 MIR-31 GGCAAGA MIMAT0009515 None CAPTEscaffold_43 86484 86544 - Bilateria Bilateria No 1
Cte-Mir-33 cte-mir-33 MIR-33 UGCAUUG MIMAT0009553 None CAPTEscaffold_91 237768 237827 - Bilateria Bilateria No 1
Cte-Mir-34 cte-mir-34 MIR-34 GGCAGUG MIMAT0009516 None CAPTEscaffold_114 443343 443404 - Bilateria Bilateria No 1 1
Cte-Mir-36 cte-mir-36 MIR-36 CACCGGG None MIMAT0013530 CAPTEscaffold_19 701730 701789 - Protostomia Protostomia No 1
Cte-Mir-67 cte-mir-67 MIR-67 CACAACC None MIMAT0009675 CAPTEscaffold_664 25476 25536 + Protostomia Protostomia No 1 1
Cte-Mir-71 cte-mir-71 MIR-71 GAAAGAC MIMAT0009517 None CAPTEscaffold_933 9934 9996 + Nephrozoa Nephrozoa No
Cte-Mir-76 cte-mir-981 MIR-76 UCGUUGU None MIMAT0009548 CAPTEscaffold_84 33972 34034 + Nephrozoa Nephrozoa No 1
Cte-Mir-87-P1 cte-mir-87b MIR-87 UGAGCAA None MIMAT0009519 CAPTEscaffold_222 219605 219665 - Protostomia Protostomia No 1
Cte-Mir-87-P2 cte-mir-87a MIR-87 UGAGCAA None MIMAT0009518 CAPTEscaffold_222 219067 219151 - Protostomia Protostomia No 1
Cte-Mir-92-o36 cte-mir-92b MIR-92 AUUGCAC None MIMAT0009521 CAPTEscaffold_14 595238 595297 - C. teleta Bilateria No
Cte-Mir-92-o37 cte-mir-92a MIR-92 GGUCGAG None MIMAT0009520 CAPTEscaffold_14 594348 594403 - C. teleta Bilateria No 1 1
Cte-Mir-92-o38 cte-mir-92c MIR-92 AUUGCAC None MIMAT0009522 CAPTEscaffold_14 594225 594286 - C. teleta Bilateria No 1
Cte-Mir-92-o61 None MIR-92 AUUGCAC None None CAPTEscaffold_14 595402 595468 - C. teleta Bilateria No 1
Cte-Mir-96-P1 cte-mir-96 MIR-96 UUGGCAC MIMAT0009523 None CAPTEscaffold_181 4334 4396 + Bilateria Bilateria No 1 1
Cte-Mir-96-P2 cte-mir-263 MIR-96 UUGGCAC MIMAT0009529 None CAPTEscaffold_522 115197 115256 - Bilateria Bilateria Unknown 1
Cte-Mir-96-P3 None MIR-96 AUGGCAC None None CAPTEscaffold_823 64095 64178 - Bilateria Bilateria No 1
Cte-Mir-124 cte-mir-124 MIR-124 AAGGCAC None MIMAT0009555 CAPTEscaffold_156 154734 154791 + Bilateria Bilateria No 1 1
Cte-Mir-133 cte-mir-133 MIR-133 UGGUCCC None MIMAT0009526 CAPTEscaffold_274 99094 99159 - Bilateria Bilateria No 1 1
Cte-Mir-137 cte-mir-137 MIR-137 AUUGCUU None MIMAT0009527 CAPTEscaffold_130 173761 173821 + Bilateria Bilateria No 1
Cte-Mir-153 cte-mir-153 MIR-153 UGCAUAG None MIMAT0009528 CAPTEscaffold_2 539891 539950 - Bilateria Bilateria No 1 1
Cte-Mir-184-P16 cte-mir-184a MIR-184 GGACGGA None MIMAT0009530 CAPTEscaffold_291 120205 120266 + C. teleta Nephrozoa No 1
Cte-Mir-184-P17 cte-mir-184b MIR-184 GGACGGA None MIMAT0009531 CAPTEscaffold_291 120376 120436 + C. teleta Nephrozoa No 1
Cte-Mir-190 cte-mir-190 MIR-190 GAUAUGU MIMAT0009532 None CAPTEscaffold_291 208586 208646 + Bilateria Bilateria Unknown
Cte-Mir-193-P1 cte-mir-193 MIR-193 ACUGGCC None MIMAT0009533 CAPTEscaffold_127 175298 175355 - Bilateria Bilateria No 1
Cte-Mir-193-P2 cte-mir-365 MIR-193 AAUGCCC None MIMAT0009543 CAPTEscaffold_481 63203 63261 - Bilateria Bilateria No 1
Cte-Mir-210-P6 cte-mir-210b MIR-210 UGUGCGU None MIMAT0013572 CAPTEscaffold_591 25368 25430 - Pleistoannelida Bilateria No
Cte-Mir-210-P7 cte-mir-210a MIR-210 UUGUGCG None MIMAT0009534 CAPTEscaffold_591 19538 19606 - Pleistoannelida Bilateria No 1
Cte-Mir-216-P1 cte-mir-216b MIR-216 AAUAUCA MIMAT0009679 None CAPTEscaffold_192 34362 34430 - Nephrozoa Nephrozoa No 1
Cte-Mir-216-P2c cte-mir-216a MIR-216 AAUCUCA MIMAT0009535 None CAPTEscaffold_192 34755 34815 - Lophotrochozoa Nephrozoa No 1
Cte-Mir-216-P2d cte-mir-216c MIR-216 AAUCUCA None MIMAT0013570 CAPTEscaffold_192 33996 34066 - Lophotrochozoa Nephrozoa No
Cte-Mir-219 cte-mir-219 MIR-219 GAUUGUC MIMAT0009556 None CAPTEscaffold_273 18981 19041 + Bilateria Bilateria No 1
Cte-Mir-242 cte-mir-242 MIR-242 UGCGUAG MIMAT0009680 None CAPTEscaffold_453 18518 18578 - Nephrozoa Nephrozoa No 1
Cte-Mir-252-P1 cte-mir-252b MIR-252 UAAGUAG MIMAT0009537 None CAPTEscaffold_296 190705 190762 + Bilateria Bilateria No 1
Cte-Mir-252-P2 cte-mir-252a MIR-252 UAAGUAC MIMAT0009536 None CAPTEscaffold_296 191494 191555 + Bilateria Bilateria Unknown 1
Cte-Mir-277-P1 cte-mir-277a MIR-277 AAAUGCA None MIMAT0013531 CAPTEscaffold_114 443887 443966 - C. teleta Protostomia No 1 1
Cte-Mir-277-P2 cte-mir-277b MIR-277 AAAUGCA None MIMAT0013575 CAPTEscaffold_114 443745 443810 - C. teleta Protostomia No 1
Cte-Mir-278 cte-mir-278 MIR-278 CGGUGGG None MIMAT0009538 CAPTEscaffold_296 103173 103248 + Bilateria Bilateria No 1
Cte-Mir-279-o34 cte-mir-279 MIR-279 GACUAGA None MIMAT0009539 CAPTEscaffold_19 703521 703582 - C. teleta Protostomia No 1
Cte-Mir-279-o35 cte-mir-996 MIR-279 GACUAGA None MIMAT0013552 CAPTEscaffold_39 146002 146056 + C. teleta Protostomia No 1 1 1
Cte-Mir-279-o36 cte-mir-2720 MIR-279 GACUAGA MIMAT0013554 MIMAT0013555 CAPTEscaffold_39 146223 146291 + C. teleta Protostomia No 1
Cte-Mir-281 cte-mir-281 MIR-281 GUCAUGG None MIMAT0009540 CAPTEscaffold_777 24457 24511 + Nephrozoa Nephrozoa No 1
Cte-Mir-315 cte-mir-315 MIR-315 UUUGAUU MIMAT0009541 None CAPTEscaffold_522 128181 128243 - Nephrozoa Nephrozoa No 1
Cte-Mir-317 cte-mir-317 MIR-317 GAACACA None MIMAT0009542 CAPTEscaffold_114 444019 444076 - Protostomia Protostomia No 1 1
Cte-Mir-375-P15 cte-mir-375 MIR-375 UUGUUCG None MIMAT0009544 CAPTEscaffold_28 184584 184641 - C. teleta Nephrozoa No 1 1
Cte-Mir-375-P16 None MIR-375 UUGUUCG None None CAPTEscaffold_28 184401 184458 - C. teleta Nephrozoa No 1
Cte-Mir-750 cte-mir-750 MIR-750 CAGAUCU None MIMAT0009547 CAPTEscaffold_910 14366 14434 + Protostomia Protostomia No 1 1
Cte-Mir-1175 cte-mir-1175 MIR-1175 GAGAUUC MIMAT0009549 MIMAT0009550 CAPTEscaffold_910 15451 15510 + Protostomia Protostomia No 1
Cte-Mir-1986 None MIR-1986 GGAUUUC None None CAPTEscaffold_12 607156 607216 + Lophotrochozoa Lophotrochozoa No
Cte-Mir-1987 cte-mir-1987 MIR-1987 CUGCCAG None MIMAT0009703 CAPTEscaffold_122 378005 378063 + Pleistoannelida Pleistoannelida No 1 1
Cte-Mir-1989 cte-mir-1989 MIR-1989 CAGCUGU MIMAT0009704 None CAPTEscaffold_107 265961 266017 - Platytrochozoa Platytrochozoa No 1
Cte-Mir-1990-P1 cte-mir-1990b MIR-1990 AAGUUGA MIMAT0013547 None CAPTEscaffold_12 600050 600112 + Lophotrochozoa Lophotrochozoa No 1
Cte-Mir-1990-P2 cte-mir-1990a MIR-1990 GUAAGUU MIMAT0013546 None CAPTEscaffold_12 606811 606875 + Lophotrochozoa Lophotrochozoa No
Cte-Mir-1990-P2-as cte-mir-1990c MIR-1990 GGGACUA None MIMAT0013548 CAPTEscaffold_12 606809 606873 - Pleistoannelida Lophotrochozoa No 1
Cte-Mir-1992 cte-mir-1992 MIR-1992 CAGCAGU None MIMAT0009700 CAPTEscaffold_189 201929 201990 + Platytrochozoa Platytrochozoa Yes 1 1
Cte-Mir-1993 cte-mir-1993 MIR-1993 AUUAUGC None MIMAT0009701 CAPTEscaffold_421 174512 174569 + Protostomia Protostomia No 1
Cte-Mir-1994 cte-mir-1994 MIR-1994 GAGACAG None MIMAT0009702 CAPTEscaffold_194 66138 66207 + Lophotrochozoa Lophotrochozoa No 1
Cte-Mir-1995 cte-mir-1995 MIR-1995 UACAUCU MIMAT0009706 None CAPTEscaffold_394 114750 114808 + Annelida Annelida Unknown 1
Cte-Mir-1996 cte-mir-1996a MIR-1996 UCAAGUG MIMAT0009707 None CAPTEscaffold_158 126000 126057 - Sipuncula + Pleistoannelida Sipuncula + Pleistoannelida No 1 1
Cte-Mir-1996-as cte-mir-1996b MIR-1996 GGAUUAC MIMAT0009712 None CAPTEscaffold_158 126202 126269 - C. teleta Sipuncula + Pleistoannelida No
Cte-Mir-1997 cte-mir-1997 MIR-1997 CUGCAGG None MIMAT0009708 CAPTEscaffold_20 24860 24918 + Sipuncula + Pleistoannelida Sipuncula + Pleistoannelida No 1 1
Cte-Mir-1998-v1 cte-mir-1998 MIR-1998 UUGAACG None MIMAT0009709 CAPTEscaffold_24 172651 172724 - Sipuncula + Pleistoannelida Sipuncula + Pleistoannelida No
Cte-Mir-1998-v2 cte-mir-1998 MIR-1998 UGAACGC None MIMAT0009709 CAPTEscaffold_24 172650 172725 - Sipuncula + Pleistoannelida Sipuncula + Pleistoannelida No 1 1
Cte-Mir-1999 cte-mir-1999 MIR-1999 GUAGCCA None MIMAT0009710 CAPTEscaffold_384 79440 79501 - Pleistoannelida Pleistoannelida No 1 1 1
Cte-Mir-2000 cte-mir-2000 MIR-2000 AAGUCUU None MIMAT0009711 CAPTEscaffold_24 172461 172517 - Sipuncula + Pleistoannelida Sipuncula + Pleistoannelida No
Cte-Mir-2001-v1 cte-mir-2001 MIR-2001 UGUGACC MIMAT0009705 None CAPTEscaffold_296 188020 188081 + Bilateria Bilateria No 1
Cte-Mir-2001-v2 cte-mir-2001 MIR-2001 UUGUGAC MIMAT0009705 None CAPTEscaffold_296 188019 188082 + Bilateria Bilateria No 1 1
Cte-Mir-2685-P1 cte-mir-2688 MIR-2685 AACUCAG MIMAT0013540 MIMAT0013541 CAPTEscaffold_777 8901 8958 - Sedentaria Pleistoannelida No 1
Cte-Mir-2685-P2 cte-mir-2685 MIR-2685 AACUCAG MIMAT0013532 MIMAT0013533 CAPTEscaffold_777 8763 8827 - Sedentaria Pleistoannelida No 1
Cte-Mir-2686-P1 cte-mir-2686c MIR-2686 AGAUGUU None MIMAT0013538 CAPTEscaffold_174 220483 220549 + C. teleta Sedentaria No 1
Cte-Mir-2686-P2 cte-mir-2686a MIR-2686 AGAUGUU MIMAT0013535 MIMAT0013536 CAPTEscaffold_174 220637 220693 + C. teleta Sedentaria No 1
Cte-Mir-2686-P3 cte-mir-2686b MIR-2686 AGAUGUU None MIMAT0013537 CAPTEscaffold_174 220806 220865 + C. teleta Sedentaria No 1
Cte-Mir-2687 cte-mir-2687 MIR-2687 AGGUAGU MIMAT0013539 None CAPTEscaffold_610 82412 82480 - Sedentaria Sedentaria No 1
Cte-Mir-2689 cte-mir-2689 MIR-2689 AUCCUGG None MIMAT0013542 CAPTEscaffold_339 64468 64526 - Sipuncula + Pleistoannelida Sipuncula + Pleistoannelida No 1
Cte-Mir-2690 cte-mir-2690 MIR-2690 GUGAAAG None MIMAT0013543 CAPTEscaffold_17 567406 567469 - Sedentaria Sedentaria No 1
Cte-Mir-2691 cte-mir-2691 MIR-2691 UUUGCAA MIMAT0013544 MIMAT0013545 CAPTEscaffold_558 79813 79879 + Sipuncula + Pleistoannelida Sipuncula + Pleistoannelida No 1 1 1
Cte-Mir-2692 cte-mir-2692 MIR-2692 CAGUCAA None MIMAT0013549 CAPTEscaffold_12 600189 600249 + Annelida Annelida No 1 1
Cte-Mir-2693 cte-mir-2693 MIR-2693 GAAAUUG None MIMAT0013550 CAPTEscaffold_18 712332 712390 + Sedentaria Sedentaria No 1
Cte-Mir-2695 cte-mir-2695 MIR-2695 AGGACUU MIMAT0013556 None CAPTEscaffold_184 188474 188536 + C. teleta C. teleta No 1
Cte-Mir-2697 cte-mir-2697 MIR-2697 GCUAUGU MIMAT0013558 None CAPTEscaffold_434 7355 7410 - C. teleta C. teleta No 1
Cte-Mir-2699 cte-mir-2699 MIR-2699 ACGGCCG MIMAT0013561 MIMAT0013562 CAPTEscaffold_300 136643 136700 - C. teleta C. teleta No 1
Cte-Mir-2700 cte-mir-2700 MIR-2700 UUUGCAA MIMAT0013563 None CAPTEscaffold_413 101606 101668 + C. teleta C. teleta Unknown 1 1
Cte-Mir-2701 cte-mir-2701 MIR-2701 CCGCAUU MIMAT0013564 None CAPTEscaffold_1278 13412 13470 + C. teleta C. teleta No 1
Cte-Mir-2702 cte-mir-2702 MIR-2702 UUCAGGU MIMAT0013565 MIMAT0013566 CAPTEscaffold_140 52385 52444 - C. teleta C. teleta No 1
Cte-Mir-2703-P1 cte-mir-2703-1 MIR-2703 GCUUUGA MIMAT0013567 MIMAT0013568 CAPTEscaffold_394 5014 5072 - C. teleta C. teleta No 1
Cte-Mir-2703-P2 cte-mir-2703-2 MIR-2703 GCUUUGA MIMAT0013567 MIMAT0013568 CAPTEscaffold_12304 451 509 + C. teleta C. teleta No 1
Cte-Mir-2704 cte-mir-2704 MIR-2704 CAUGCAA MIMAT0013569 None CAPTEscaffold_102 389220 389279 + C. teleta C. teleta No 1
Cte-Mir-2705 cte-mir-2705 MIR-2705 CUGCAAG None MIMAT0013571 CAPTEscaffold_122 377048 377109 + Pleistoannelida Pleistoannelida No 1 1
Cte-Mir-2706 cte-mir-2706 MIR-2706 AAGAUAU None MIMAT0013573 CAPTEscaffold_518 98983 99044 + C. teleta C. teleta No 1 1 1
Cte-Mir-2707 cte-mir-2707 MIR-2707 UACUUAU None MIMAT0013574 CAPTEscaffold_105 375781 375840 - Pleistoannelida Pleistoannelida No 1 1
Cte-Mir-2708 cte-mir-2708 MIR-2708 GAAGAUU None MIMAT0013576 CAPTEscaffold_1308 9126 9184 - C. teleta C. teleta No 1 1
Cte-Mir-2710 cte-mir-2710 MIR-2710 CCACUGU MIMAT0013579 None CAPTEscaffold_445 46126 46181 - C. teleta C. teleta No 1 1
Cte-Mir-2711 cte-mir-2711 MIR-2711 UUGGUGU MIMAT0013580 None CAPTEscaffold_234 20073 20133 + C. teleta C. teleta No 1
Cte-Mir-2716 cte-mir-2716 MIR-2716 AGAGAUG None MIMAT0013585 CAPTEscaffold_824 60226 60296 - C. teleta C. teleta No 1
Cte-Mir-2719 cte-mir-2719 MIR-2719 GGCUUUU MIMAT0013588 None CAPTEscaffold_234 18731 18792 - C. teleta C. teleta Unknown 1
Cte-Novel-1 None CTE-NOVEL-1 UUCAGAA None None CAPTEscaffold_149 353474 353536 - C. teleta C. teleta No 1 1
Cte-Novel-2 None CTE-NOVEL-2 UACCAUA None None CAPTEscaffold_62 217428 217487 + C. teleta C. teleta No
Cte-Novel-3-P1 None CTE-NOVEL-3 AUAUGAG None None CAPTEscaffold_298 127540 127600 + C. teleta C. teleta No 1
Cte-Novel-3-P2 None CTE-NOVEL-3 AUAUGAG None None CAPTEscaffold_8851 769 828 - C. teleta C. teleta No 1
Cte-Novel-4 None CTE-NOVEL-4 CUACCUG None None CAPTEscaffold_35 182586 182644 + C. teleta C. teleta No 1

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