| MirGeneDB ID | Cte-Novel-3-P1 |
|---|---|
| Family name | CTE-NOVEL-3 (all species) |
| Seed | AUAUGAG |
| Species | Polychaete worm (Capitella teleta) |
| MiRBase ID | |
| Paralogues | Cte-Novel-3-P2 |
| Orthologues | |
| Node of Origin (locus) | C. teleta |
| Node of Origin (family) | C. teleta |
| Genome context (Capitella_teleta_v1.0) |
CAPTEscaffold_298: 127540-127600 [+] Ensembl |
| Precursor (pre-Mir +30nt flank) | UCCACCGUUGUUGUUCUCGCGUGGAAAUGGACUGUAUCUUCACUCGAAUUUCAAAAAAACAAGAAAAGAAAUAUGAGUGAAGAUGCAGUCCAUUUCCAUUGUUUAUACGUCAGUCACCGCAGet precursor sequence |
| Structure | 10 20 30 40 50 UCCACCGUUGUUGUUCUC- -| A AAAAAAA GC GUGGAAAUGGACUGUAUCUUCACUCG AUUUC \ UG UACCUUUACCUGACGUAGAAGUGAGU UAAAG C ACGCCACUGACUGCAUAUU U^ A AAAAGAA . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cte-Novel-3-P1_5p* |
| mirBase accession | None |
| Sequence |
0- ACUGUAUCUUCACUCGAAUUUC -22
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|
| Mature sequence | Cte-Novel-3-P1_3p |
| mirBase accession | None |
| Sequence |
39- AAUAUGAGUGAAGAUGCAGUCC -61
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|
