MirGeneDB 3.0
MirGeneDB ID

Cte-Mir-10-P7-as

Family name MIR-10 (all species)
Seed ACACUGU
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-10c
Paralogues Cte-Mir-10-P1  Cte-Mir-10-P2  Cte-Mir-10-P3  Cte-Mir-10-P4  Cte-Mir-10-P5  Cte-Mir-10-P6  Cte-Mir-10-P7  Cte-Mir-10-P8 
Orthologues Adi-Mir-10  Asp-Mir-10  Dgr-Mir-10-P7  Efe-Mir-10-P7a  Efe-Mir-10-P7b  Nve-Mir-10  Ofu-Mir-10-P7  Pdu-Mir-10-P7 
Node of Origin (locus) C. teleta
Node of Origin (family) Eumetazoa
Genome context
(Capitella_teleta_v1.0)		 CAPTEscaffold_70: 317882-317943 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-10-P7-as)		 Mir-10-P7 CAPTEscaffold_70: 317880-317941 [-] Ensembl
Mir-10-P7-as CAPTEscaffold_70: 317882-317943 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAAGAAGGACGAGUUUUAGCAAUAACCAUGUACACUGUAGAAUAGGCUUGUGAUUUCAAUUAGUCAACACAAGCUCGGUUCUACAGGGUCAAUGGGCAUUGUGACUUUCAUCUCCAUGACGA
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Structure
        10          20        30        40         50          
GAAGAAGGACGAGUUUUA--     AA    GU  A         A-|       AUUUCAA 
                    GCAAU  CCAU  AC CUGUAGAAU  GGCUUGUG       \
                    UGUUA  GGUA  UG GACAUCUUG  UCGAACAC       U
AGCAGUACCUCUACUUUCAG     CG    AC  G         GC^       AACUGAU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ea Fe Fe La La Ma Ma To
Mature sequence

Cte-Mir-10-P7-as_5p
mirBase accessionMIMAT0009511
Sequence 
0- UACACUGUAGAAUAGGCUUGUG -22
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Star sequence

Cte-Mir-10-P7-as_3p*
mirBase accessionNone
Sequence 
39- CAAGCUCGGUUCUACAGGGUCAA -62
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