MirGeneDB ID | Dgr-Mir-10-P7 |
---|---|
Family name | MIR-10 (all species) |
Seed | ACCCUGU |
Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
MiRBase ID | |
Paralogues | Dgr-Mir-10-P1 Dgr-Mir-10-P2 Dgr-Mir-10-P3w Dgr-Mir-10-P3x Dgr-Mir-10-P3y Dgr-Mir-10-P4 |
Orthologues | Adi-Mir-10 Asp-Mir-10 Cte-Mir-10-P7 Cte-Mir-10-P7-as Efe-Mir-10-P7a Efe-Mir-10-P7b Nve-Mir-10 Ofu-Mir-10-P7 Pdu-Mir-10-P7 |
Node of Origin (locus) | Annelida |
Node of Origin (family) | Eumetazoa |
Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000018.1: 579676-579735 [+] |
Precursor (pre-Mir +30nt flank) | GAAUAUGUACGGCAUUCACAACUGACUAUGUACCCUGUAGAACCGAACUUGUGAAAUAAAUUUAACCACAAGUUAGAUUUUCAGGGUUCAUAGACAGUUGUAUAAUUCUAUCCUUCUCAAGet precursor sequence |
Structure | 10 20 30 40 50 GAAUAUGUACGGCAUUC--| A U U CCG GAAAUAA ACAACUG CUAUG ACCCUG AGAA AACUUGU \ UGUUGAC GAUAC UGGGAC UUUU UUGAACA A AACUCUUCCUAUCUUAAUA^ A U - AGA CCAAUUU . 110 100 90 80 70 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | No |
Mature sequence | Dgr-Mir-10-P7_5p (predicted) |
mirBase accession | None |
Sequence |
0- UACCCUGUAGAACCGAACUUGU -22
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|
Star sequence | Dgr-Mir-10-P7_3p* (predicted) |
mirBase accession | None |
Sequence |
39- AAGUUAGAUUUUCAGGGUUCA -60
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