MirGeneDB 3.0
MirGeneDB ID

Pdu-Mir-10-P7

Family name MIR-10 (all species)
Seed ACCCUGU
Species Dumerils clam worm (Platynereis dumerilii)
MiRBase ID
Paralogues Pdu-Mir-10-P1  Pdu-Mir-10-P2  Pdu-Mir-10-P3  Pdu-Mir-10-P4  Pdu-Mir-10-P4-as  Pdu-Mir-10-P5  Pdu-Mir-10-P8 
Orthologues Adi-Mir-10  Asp-Mir-10  Cte-Mir-10-P7  Cte-Mir-10-P7-as  Dgr-Mir-10-P7  Efe-Mir-10-P7a  Efe-Mir-10-P7b  Nve-Mir-10  Ofu-Mir-10-P7 
Node of Origin (locus) Annelida
Node of Origin (family) Eumetazoa
Genome context
(GCA_026936325.1_EMBL_pdum_1.0)		 JAPTHN010000027.1: 3180450-3180508 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GGCUGGCCAAGAGAUUUAGAGGUGACCAUUCACCCUGUAGAACCGAGCUUGUGCUGAAUUCAAAACACAGGCUGGUUACACCGGGUCAAUGGGAUCCUUCCAAUUCUACUUAUCAUCAA
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Structure
        10          20        30        40        50         
GGCUGGCCAAGAGAUUUA--|   UGA     C    U  AG    G        CUGAA 
                    GAGG   CCAUU ACCC GU  AACC AGCUUGUG     U
                    UUCC   GGUAA UGGG CA  UUGG UCGGACAC     U
AACUACUAUUCAUCUUAACC^   UAG     C    C  CA    -        AAAAC 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
24 24 24 24 24 36 36 36 36 36 48 48 48 48 48 6d 6d 6d 6d 72 72 72 72 72
Mature sequence

Pdu-Mir-10-P7_5p
mirBase accessionNone
Sequence 
0- CACCCUGUAGAACCGAGCUUGUG -23
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Star sequence

Pdu-Mir-10-P7_3p*
mirBase accessionNone
Sequence 
37- CAGGCUGGUUACACCGGGUCAA -59
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