MirGeneDB 3.0
MirGeneDB ID

Pdu-Mir-10-P8

Family name MIR-10 (all species)
Seed ACCCUGU
Species Dumerils clam worm (Platynereis dumerilii)
MiRBase ID
Paralogues Pdu-Mir-10-P1  Pdu-Mir-10-P2  Pdu-Mir-10-P3  Pdu-Mir-10-P4  Pdu-Mir-10-P4-as  Pdu-Mir-10-P5  Pdu-Mir-10-P7 
Orthologues Adi-Mir-10  Asp-Mir-10  Cte-Mir-10-P8  Nve-Mir-10 
Node of Origin (locus) Pleistoannelida
Node of Origin (family) Eumetazoa
Genome context
(GCA_026936325.1_EMBL_pdum_1.0)		 JAPTHN010000027.1: 3503212-3503270 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUUUUGGAAAACCAACUGGAUUUUGGAAGGAACCCUGUGGAUACGGGCUUGUGUCGAUUACAUCAACAAGCUCGUUUUUACAAGGUGUCUCCCAAAUACCAAUUCCAUCUACAACAUUU
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Structure
        10          20        30        40        50         
CUUUUGGAAAACCAACU--| AU     A  GA   C      U          GUCGAU 
                   GG  UUUGG AG  ACC UGUGGA ACGGGCUUGU      \
                   CC  AAACC UC  UGG ACAUUU UGCUCGAACA      U
UUUACAACAUCUACCUUAA^ AU     C  UG   A      U          ACUACA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
24 24 24 24 24 36 36 36 36 36 48 48 48 48 48 6d 6d 6d 6d 72 72 72 72 72
Mature sequence

Pdu-Mir-10-P8_5p
mirBase accessionNone
Sequence 
0- AACCCUGUGGAUACGGGCUUGU -22
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Star sequence

Pdu-Mir-10-P8_3p*
mirBase accessionNone
Sequence 
37- AAGCUCGUUUUUACAAGGUGUC -59
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