MirGeneDB ID | Ofu-Mir-10-P7 |
Family name |
MIR-10 (all species) |
Seed |
ACCCUGU |
Species |
Tubeworm (Owenia fusiformis) |
MiRBase ID |
|
Paralogues |
Ofu-Mir-10-P1
Ofu-Mir-10-P2
Ofu-Mir-10-P3
Ofu-Mir-10-P4
Ofu-Mir-10-P5
Ofu-Mir-10-P6
|
Orthologues |
Adi-Mir-10
Asp-Mir-10
Cte-Mir-10-P7
Cte-Mir-10-P7-as
Dgr-Mir-10-P7
Efe-Mir-10-P7a
Efe-Mir-10-P7b
Nve-Mir-10
Pdu-Mir-10-P7
|
Node of Origin (locus) |
Annelida
|
Node of Origin (family) |
Eumetazoa
|
Genome context (GCA_903813345.2_Owenia) |
CAIIXF020000001.1: 18228320-18228380 [+]
|
Precursor (pre-Mir +30nt flank) |
AUAGUUGGAAGAAAAUGUGGGAUUCUCUUGUACCCUGUAGAACCGAGCUUGUGCUGAAGUUUAGAACCACAAGCCAUUCUACAGUGUGCAUGGAAAUUCUUACGAUUCGACAUAUACACGU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AUAGUUGGAAGAAAAUGU---| CU U C CCGA CUGAAG
GGGAUU C UGUAC CUGUAGAA GCUUGUG U
UCUUAA G ACGUG GACAUCUU CGAACAC U
UGCACAUAUACAGCUUAGCAU^ AG U U AC-- CAAGAU
. 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Ofu-Mir-10-P7_5p |
mirBase accession | None |
Sequence |
0- UACCCUGUAGAACCGAGCUUGUG -23
Get sequence
|
Star sequence |
Ofu-Mir-10-P7_3p* |
mirBase accession | None |
Sequence |
39- CAAGCCAUUCUACAGUGUGCAU -61
Get sequence
|