Mir-10-P4

MirGeneDB ID

Ofu-Mir-10-P4

Family name

MIR-10 (all species)

Seed

ACCCUGU

Species

Tubeworm (Owenia fusiformis)

MiRBase ID

Paralogues

Ofu-Mir-10-P1 Ofu-Mir-10-P2 Ofu-Mir-10-P3 Ofu-Mir-10-P5 Ofu-Mir-10-P6 Ofu-Mir-10-P7

Orthologues

Aae-Mir-10-P4 Adi-Mir-10 Aga-Mir-10-P4 Asp-Mir-10 Asu-Mir-10-P4 Ava-Mir-10-P4 Bge-Mir-10-P4 Bko-Mir-10-P4o1 Bko-Mir-10-P4o2 Bpl-Mir-10-P4 Csc-Mir-10-P4q Csc-Mir-10-P4r Cte-Mir-10-P4 Dan-Mir-10-P4 Dgr-Mir-10-P4 Dlo-Mir-10-P4-v1 Dlo-Mir-10-P4-v2 Dma-Mir-10-P4 Dme-Mir-10-P4 Dmo-Mir-10-P4 Dpu-Mir-10-P4 Dsi-Mir-10-P4 Dya-Mir-10-P4 Efe-Mir-10-P4a Efe-Mir-10-P4b Efe-Mir-10-P4c Gpa-Mir-10-P4 Gsa-Mir-10-P4 Hme-Mir-10-P4 Isc-Mir-10-P4 Lan-Mir-10-P4d Lan-Mir-10-P4e Llo-Mir-10-P4-v1 Llo-Mir-10-P4-v2 Lpo-Mir-10-P4j Lpo-Mir-10-P4k Lpo-Mir-10-P4l Lpo-Mir-10-P4m Lpo-Mir-10-P4n Nve-Mir-10 Pca-Mir-10-P4 Pcr-Mir-10-P4s1 Pcr-Mir-10-P4s2 Pcr-Mir-10-P4t Pdu-Mir-10-P4 Pdu-Mir-10-P4-as Snu-Mir-10-P4 Tca-Mir-10-P4 Tur-Mir-10-P4u Tur-Mir-10-P4v Tur-Mir-10-P4w

Node of Origin (locus)

Protostomia

Node of Origin (family)

Eumetazoa

Genome context
(GCA_903813345.2_Owenia)

CAIIXF020000001.1: 18379551-18379609 [-]

Precursor
(pre-Mir +30nt flank)

CGCAGGCAGUUUGUCGAACAUAUUAGAGUUUACCCUGUAGAUCCGGGUUUGUGUAUCGUUGUAAACAGAAGCUCAGUUCUACAGGUAUAUGAUGACUUGUUCUAAUUCAACAAAACAAC

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Structure

        10          20        30        40        50         
CGCAGGCAGUUUGUCGA--|  UA   GA  U    C      UCC      G   AUCG 
                   ACA  UUA  GU UACC UGUAGA   GGGUUU UGU    U
                   UGU  AGU  UA AUGG ACAUCU   CUCGAA ACA    U
CAACAAAACAACUUAAUCU^  UC   AG  U    -      UGA      G   AAUG 
       110       100        90         80        70        60

Deep sequencing

3' NTU

Motifs

Tissue expression

Ow	Ow

Mature sequence

Ofu-Mir-10-P4_5p

mirBase accession

None

Sequence

0- UACCCUGUAGAUCCGGGUUUGUGU -24

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Co-mature sequence

Ofu-Mir-10-P4_3p

mirBase accession

None

Sequence

36- AGAAGCUCAGUUCUACAGGUAUA -59

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