MirGeneDB 3.0
MirGeneDB ID

Bpl-Mir-10-P4

Family name MIR-10 (all species)
Seed AAGCUCG
Species Monogonont Rotifer 1 (Brachionus plicatilis)
MiRBase ID
Paralogues Bpl-Mir-10-P2  Bpl-Mir-10-P3 
Orthologues Aae-Mir-10-P4  Adi-Mir-10  Aga-Mir-10-P4  Asp-Mir-10  Asu-Mir-10-P4  Ava-Mir-10-P4  Bge-Mir-10-P4  Bko-Mir-10-P4o1  Bko-Mir-10-P4o2  Csc-Mir-10-P4q  Csc-Mir-10-P4r  Cte-Mir-10-P4  Dan-Mir-10-P4  Dgr-Mir-10-P4  Dlo-Mir-10-P4-v1  Dlo-Mir-10-P4-v2  Dma-Mir-10-P4  Dme-Mir-10-P4  Dmo-Mir-10-P4  Dpu-Mir-10-P4  Dsi-Mir-10-P4  Dya-Mir-10-P4  Efe-Mir-10-P4a  Efe-Mir-10-P4b  Efe-Mir-10-P4c  Gpa-Mir-10-P4  Gsa-Mir-10-P4  Hme-Mir-10-P4  Isc-Mir-10-P4  Lan-Mir-10-P4d  Lan-Mir-10-P4e  Llo-Mir-10-P4-v1  Llo-Mir-10-P4-v2  Lpo-Mir-10-P4j  Lpo-Mir-10-P4k  Lpo-Mir-10-P4l  Lpo-Mir-10-P4m  Lpo-Mir-10-P4n  Nve-Mir-10  Ofu-Mir-10-P4  Pca-Mir-10-P4  Pcr-Mir-10-P4s1  Pcr-Mir-10-P4s2  Pcr-Mir-10-P4t  Pdu-Mir-10-P4  Pdu-Mir-10-P4-as  Snu-Mir-10-P4  Tca-Mir-10-P4  Tur-Mir-10-P4u  Tur-Mir-10-P4v  Tur-Mir-10-P4w 
Node of Origin (locus) Protostomia
Node of Origin (family) Eumetazoa
Genome context
(Bpl_ASM1027981)		 QEOQ01000707.1: 752802-752861 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUUGGAAAAUAAAAGUUUCUUUGUAAUUACCUUCGUAAAACGAGAUUUUGUAGUUUAUGAAUUCUCGAAAGCUCGUUGAUACGAAGGUUAAAUACAAGAGUUCUUAAGCAACAAUUUUA
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Structure
        10          20         30         40        50         
AUUUGGAAAAUAAAAGU--   U     A  -         A-|     A     UAGUUUA 
                   UUC UUGUA UU ACCUUCGUA  AACGAG UUUUG       \
                   GAG AACAU AA UGGAAGCAU  UUGCUC AAAGC       U
AUUUUAACAACGAAUUCUU   -     A  U         AG^     G     UCUUAAG 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Bpl-Mir-10-P4_5p*
mirBase accessionNone
Sequence 
0- CCUUCGUAAAACGAGAUUUUG -21
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Mature sequence

Bpl-Mir-10-P4_3p
mirBase accessionNone
Sequence 
38- AAAGCUCGUUGAUACGAAGGUU -60
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