| MirGeneDB ID | Bko-Mir-10-P4o1 |
|---|---|
| Family name | MIR-10 (all species) |
| Seed | AAGCUCG |
| Species | Monogonont Rotifer 2 (Brachionus koreanus) |
| MiRBase ID | |
| Paralogues | Bko-Mir-10-P2 Bko-Mir-10-P3 Bko-Mir-10-P4o2 |
| Orthologues | Aae-Mir-10-P4 Adi-Mir-10 Aga-Mir-10-P4 Asp-Mir-10 Asu-Mir-10-P4 Ava-Mir-10-P4 Bge-Mir-10-P4 Bpl-Mir-10-P4 Cte-Mir-10-P4 Dan-Mir-10-P4 Dgr-Mir-10-P4 Dlo-Mir-10-P4-v1 Dlo-Mir-10-P4-v2 Dma-Mir-10-P4 Dme-Mir-10-P4 Dmo-Mir-10-P4 Dpu-Mir-10-P4 Dsi-Mir-10-P4 Dya-Mir-10-P4 Gpa-Mir-10-P4 Gsa-Mir-10-P4 Hme-Mir-10-P4 Isc-Mir-10-P4 Llo-Mir-10-P4-v1 Llo-Mir-10-P4-v2 Nve-Mir-10 Ofu-Mir-10-P4 Pca-Mir-10-P4 Pdu-Mir-10-P4 Pdu-Mir-10-P4-as Snu-Mir-10-P4 Tca-Mir-10-P4 |
| Node of Origin (locus) | B. koreanus |
| Node of Origin (family) | Eumetazoa |
| Genome context (Brachionus_koreanusGCA_016987375.1_Bk_v0.5.4_genom) |
|
| Precursor (pre-Mir +30nt flank) | CCUUCGUAAAACGAGAUUUUGUAGUUUUGAUUUUUCCAAAAGCUCGUUGAUACGAAGGUUGet precursor sequence |
| Structure | 10 20 -- A-| A U UUUU CCUUCGUA AACGAG UUUUG AG \ GGAAGCAU UUGCUC AAAAC UU G UU AG^ G C UUUA . 50 40 30 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Bko-Mir-10-P4o1_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CCUUCGUAAAACGAGAUUUUG -21
Get sequence
|
| Mature sequence | Bko-Mir-10-P4o1_3p |
| mirBase accession | None |
| Sequence |
38- AAAGCUCGUUGAUACGAAGGUU -60
Get sequence
|
