MirGeneDB 3.0
MirGeneDB ID

Bko-Mir-10-P4o1

Family name MIR-10 (all species)
Seed AAGCUCG
Species Monogonont Rotifer 2 (Brachionus koreanus)
MiRBase ID
Paralogues Bko-Mir-10-P2  Bko-Mir-10-P3  Bko-Mir-10-P4o2 
Orthologues Aae-Mir-10-P4  Adi-Mir-10  Aga-Mir-10-P4  Asp-Mir-10  Asu-Mir-10-P4  Ava-Mir-10-P4  Bge-Mir-10-P4  Bpl-Mir-10-P4  Cte-Mir-10-P4  Dan-Mir-10-P4  Dgr-Mir-10-P4  Dlo-Mir-10-P4-v1  Dlo-Mir-10-P4-v2  Dma-Mir-10-P4  Dme-Mir-10-P4  Dmo-Mir-10-P4  Dpu-Mir-10-P4  Dsi-Mir-10-P4  Dya-Mir-10-P4  Gpa-Mir-10-P4  Gsa-Mir-10-P4  Hme-Mir-10-P4  Isc-Mir-10-P4  Llo-Mir-10-P4-v1  Llo-Mir-10-P4-v2  Nve-Mir-10  Ofu-Mir-10-P4  Pca-Mir-10-P4  Pdu-Mir-10-P4  Pdu-Mir-10-P4-as  Snu-Mir-10-P4  Tca-Mir-10-P4 
Node of Origin (locus) B. koreanus
Node of Origin (family) Eumetazoa
Genome context
(Brachionus_koreanusGCA_016987375.1_Bk_v0.5.4_genom)		 PJRA01000303.1: 225428-225487 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACUAAAAAAAUUUAGAUUCUUUUGGAAUUGCCUUCGUAAAACGAGAUUUUGUAGUUUUGAUUUUUCCAAAAGCUCGUUGAUACGAAGGUUAAAUACAAAAGUUAUCGUUCCAUCAGAUCA
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Structure
        10         20         30         40        50         
ACUAAAAAAAUUUAGAUU-      GAAUU-         A-|     A     UAGUUUU 
                   CUUUUG      GCCUUCGUA  AACGAG UUUUG       \
                   GAAAAC      UGGAAGCAU  UUGCUC AAAAC       G
ACUAGACUACCUUGCUAUU      AUAAAU         AG^     G     CUUUUUA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
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Star sequence

Bko-Mir-10-P4o1_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCUUCGUAAAACGAGAUUUUG -21
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Mature sequence

Bko-Mir-10-P4o1_3p
mirBase accessionNone
Sequence 
38- AAAGCUCGUUGAUACGAAGGUU -60
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