MirGeneDB 3.0
MirGeneDB ID

Snu-Mir-10-P4

Family name MIR-10 (all species)
Seed GAAGCUC
Species Peanut worm (Sipunculus nudus)
MiRBase ID
Paralogues Snu-Mir-10-P1  Snu-Mir-10-P2  Snu-Mir-10-P3  Snu-Mir-10-P5 
Orthologues Aae-Mir-10-P4  Adi-Mir-10  Aga-Mir-10-P4  Asp-Mir-10  Asu-Mir-10-P4  Ava-Mir-10-P4  Bge-Mir-10-P4  Bko-Mir-10-P4-o2  Bpl-Mir-10-P4  Csc-Mir-10-P4q  Csc-Mir-10-P4r  Cte-Mir-10-P4  Dan-Mir-10-P4  Dgr-Mir-10-P4  Dlo-Mir-10-P4-v1  Dlo-Mir-10-P4-v2  Dma-Mir-10-P4  Dme-Mir-10-P4  Dmo-Mir-10-P4  Dpu-Mir-10-P4  Dsi-Mir-10-P4  Dya-Mir-10-P4  Efe-Mir-10-P4a  Efe-Mir-10-P4b  Efe-Mir-10-P4c  Gpa-Mir-10-P4  Gsa-Mir-10-P4  Hme-Mir-10-P4  Isc-Mir-10-P4  Lan-Mir-10-P4d  Lan-Mir-10-P4e  Llo-Mir-10-P4-v1  Llo-Mir-10-P4-v2  Lpo-Mir-10-P4j  Lpo-Mir-10-P4k  Lpo-Mir-10-P4l  Lpo-Mir-10-P4m  Lpo-Mir-10-P4n  Nve-Mir-10  Ofu-Mir-10-P4  Pca-Mir-10-P4  Pcr-Mir-10-P4s1  Pcr-Mir-10-P4s2  Pcr-Mir-10-P4t  Pdu-Mir-10-P4  Pdu-Mir-10-P4-as  Tca-Mir-10-P4  Tur-Mir-10-P4u  Tur-Mir-10-P4v  Tur-Mir-10-P4w 
Node of Origin (locus) Protostomia
Node of Origin (family) Eumetazoa
Genome context
(GCA_026874595.1_ASM2687459v1_Sipunculus_nudus)		 CM049317.1: 56712324-56712380 [+]
Precursor
(pre-Mir +30nt flank)
CACAUGCCAACAAGACCACACCCCGCAUGUACCCUGUAGACCCGGGUUUGUGUCUCCUUCUAAACAGAAGCUCGACUCUACAGGUAUUUAUCGGGUGUGUUUACAGCAUAGAAGCUC
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Structure
        10        20          30        40        50        
CACAUGCCAACAAGACCA   -    CAU-|    C      CC       G   CUCC 
                  CAC CCCG    GUACC UGUAGA  CGGGUUU UGU    U
                  GUG GGGC    UAUGG ACAUCU  GCUCGAA ACA    U
CUCGAAGAUACGACAUUU   U    UAUU^    -      CA       G   AAUC 
     110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ph
Star sequence

Snu-Mir-10-P4_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACCCUGUAGACCCGGGUUUGUGU -23
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Mature sequence

Snu-Mir-10-P4_3p
mirBase accessionNone
Sequence 
35- AGAAGCUCGACUCUACAGGUAU -57
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