MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-10-P4

Family name MIR-10 (all species)
Seed AAGCUCG
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-10-P3v  Ava-Mir-10-P3w 
Orthologues Aae-Mir-10-P4  Adi-Mir-10  Aga-Mir-10-P4  Asp-Mir-10  Asu-Mir-10-P4  Bge-Mir-10-P4  Bko-Mir-10-P4o1  Bko-Mir-10-P4o2  Bpl-Mir-10-P4  Csc-Mir-10-P4q  Csc-Mir-10-P4r  Cte-Mir-10-P4  Dan-Mir-10-P4  Dgr-Mir-10-P4  Dlo-Mir-10-P4-v1  Dlo-Mir-10-P4-v2  Dma-Mir-10-P4  Dme-Mir-10-P4  Dmo-Mir-10-P4  Dpu-Mir-10-P4  Dsi-Mir-10-P4  Dya-Mir-10-P4  Efe-Mir-10-P4a  Efe-Mir-10-P4b  Efe-Mir-10-P4c  Gpa-Mir-10-P4  Gsa-Mir-10-P4  Hme-Mir-10-P4  Isc-Mir-10-P4  Lan-Mir-10-P4d  Lan-Mir-10-P4e  Llo-Mir-10-P4-v1  Llo-Mir-10-P4-v2  Lpo-Mir-10-P4j  Lpo-Mir-10-P4k  Lpo-Mir-10-P4l  Lpo-Mir-10-P4m  Lpo-Mir-10-P4n  Nve-Mir-10  Ofu-Mir-10-P4  Pca-Mir-10-P4  Pcr-Mir-10-P4s1  Pcr-Mir-10-P4s2  Pcr-Mir-10-P4t  Pdu-Mir-10-P4  Pdu-Mir-10-P4-as  Snu-Mir-10-P4  Tca-Mir-10-P4  Tur-Mir-10-P4u  Tur-Mir-10-P4v  Tur-Mir-10-P4w 
Node of Origin (locus) Protostomia
Node of Origin (family) Eumetazoa
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075496.1: 8470489-8470551 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UAAGUGUUCUCAAAUAUUCAUUCAUCAGUGACCCGCUUAGUAACGAACUUUUGUAAGAGAUAUAAACUCAGAAGCUCGUCACUUAACGGGUCUCAUGUGAAUGAUCAUCGUGAUACGUAAAUG
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Structure
        10          20         30        40        50        60 
UAAGUGUUCUCAAAUAU--|      U  GU-      CUU   A    A      UAAGAGA 
                   UCAUUCA CA   GACCCG   AGU ACGA CUUUUG       \
                   AGUAAGU GU   CUGGGC   UCA UGCU GAAGAC       U
GUAAAUGCAUAGUGCUACU^      -  ACU      AAU   C    C      UCAAAUA 
 120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
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Star sequence

Ava-Mir-10-P4_5p*
mirBase accessionNone
Sequence 
0- ACCCGCUUAGUAACGAACUUUUG -23
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Mature sequence

Ava-Mir-10-P4_3p
mirBase accessionNone
Sequence 
40- GAAGCUCGUCACUUAACGGGUCU -63
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