MirGeneDB 3.0
MirGeneDB ID

Aga-Mir-10-P4

Family name MIR-10 (all species)
Seed ACCCUGU
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID aga-mir-993
Paralogues Aga-Mir-10-P1-v1  Aga-Mir-10-P1-v2  Aga-Mir-10-P2  Aga-Mir-10-P3 
Orthologues Aae-Mir-10-P4  Adi-Mir-10  Asp-Mir-10  Asu-Mir-10-P4  Ava-Mir-10-P4  Bge-Mir-10-P4  Bko-Mir-10-P4-o2  Bpl-Mir-10-P4  Csc-Mir-10-P4q  Csc-Mir-10-P4r  Cte-Mir-10-P4  Dan-Mir-10-P4  Dgr-Mir-10-P4  Dlo-Mir-10-P4-v1  Dlo-Mir-10-P4-v2  Dma-Mir-10-P4  Dme-Mir-10-P4  Dmo-Mir-10-P4  Dpu-Mir-10-P4  Dsi-Mir-10-P4  Dya-Mir-10-P4  Efe-Mir-10-P4a  Efe-Mir-10-P4b  Efe-Mir-10-P4c  Gpa-Mir-10-P4  Gsa-Mir-10-P4  Hme-Mir-10-P4  Isc-Mir-10-P4  Lan-Mir-10-P4d  Lan-Mir-10-P4e  Llo-Mir-10-P4-v1  Llo-Mir-10-P4-v2  Lpo-Mir-10-P4j  Lpo-Mir-10-P4k  Lpo-Mir-10-P4l  Lpo-Mir-10-P4m  Lpo-Mir-10-P4n  Nve-Mir-10  Ofu-Mir-10-P4  Pca-Mir-10-P4  Pcr-Mir-10-P4s1  Pcr-Mir-10-P4s2  Pcr-Mir-10-P4t  Pdu-Mir-10-P4  Pdu-Mir-10-P4-as  Snu-Mir-10-P4  Tca-Mir-10-P4  Tur-Mir-10-P4u  Tur-Mir-10-P4v  Tur-Mir-10-P4w 
Node of Origin (locus) Protostomia
Node of Origin (family) Eumetazoa
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)		 NC_064601.1: 57600661-57600751 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAGUUAACAUUUAUGCGCUCCUCCGUGACCUACCCUGUAGUUCCGGGCUUUUGUGGGUUGAAAUAUUAUACAUAUAUUAUCUCAUAUACGCUUAUCAGAAGCUCGUUUCUAUAGAGGUAUCUCAGGGAGUGAACAAUCUUCAGUCGUGUAA
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Structure
        10         20         30         40        50        60        70    
AAGUUAACAUUUAUGCGC-  -    G   CC    -|     UUC          UGGGUUGAAAUAUUAUACAU 
                   UC CUCC UGA  UACC CUGUAG   CGGGCUUUUG                    A
                   AG GAGG ACU  AUGG GAUAUC   GCUCGAAGAC                    U
AAUGUGCUGACUUCUAACA  U    G   CU    A^     UUU          UAUUCGCAUAUACUCUAUUA 
 .       140       130       120       110       100        90        80
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sr Sr Sr Sr Sr Sr Sr Sr Sr
Mature sequence

Aga-Mir-10-P4_5p
mirBase accessionNone
Sequence 
0- UACCCUGUAGUUCCGGGCUUUUG -23
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Co-mature sequence

Aga-Mir-10-P4_3p
mirBase accessionMIMAT0010103
Sequence 
67- GAAGCUCGUUUCUAUAGAGGUAUC -91
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