MirGeneDB 3.0
MirGeneDB ID

Cte-Mir-2691

Family name MIR-2691 (all species)
Seed UUUGCAA
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-2691
Paralogues
Orthologues Efe-Mir-2691-P1  Efe-Mir-2691-P2  Efe-Mir-2691-P3  Efe-Mir-2691-P4  Pdu-Mir-2691-P1  Pdu-Mir-2691-P2a  Pdu-Mir-2691-P2b  Pdu-Mir-2691-P3  Pdu-Mir-2691-P4  Pdu-Mir-2691-P5-v1  Pdu-Mir-2691-P5-v2  Snu-Mir-2691 
Node of Origin (locus) Sipuncula + Pleistoannelida
Node of Origin (family) Sipuncula + Pleistoannelida
Genome context
(Capitella_teleta_v1.0)		 CAPTEscaffold_558: 79813-79879 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GCACCAGCGCUGCUGCUGCUACUGCAGGCCGACGGUGAGACUUCUGCAAAGCCGUGUCAUUUGCAAAUAACAGGUUUUGCAAAGUAUCACAGCCUGUCUGCGGUAUGGCACACCGACGAUGAUGGAU
Get precursor sequence
Structure
        10         20          30        40        50        60   
GCACCAGCGCUGCUGCU-   --|        CGACG    G    C         GUGUCAUUU 
                  GCU  ACUGCAGGC     GUGA ACUU UGCAAAGCC         \
                  CGG  UGGCGUCUG     CACU UGAA ACGUUUUGG         G
UAGGUAGUAGCAGCCACA   UA^        UCCGA    A    -         ACAAUAAAC 
     120       110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ea Fe Fe La La Ma Ma To
Star sequence

Cte-Mir-2691_5p*
mirBase accessionMIMAT0013544
Sequence 
0- GACGGUGAGACUUCUGCAAAGCC -23
Get sequence
Mature sequence

Cte-Mir-2691_3p
mirBase accessionMIMAT0013545
Sequence 
44- UUUUGCAAAGUAUCACAGCCUGU -67
Get sequence