MirGeneDB 3.0
MirGeneDB ID

Snu-Mir-2691

Family name MIR-2691 (all species)
Seed UUUGCAA
Species Peanut worm (Sipunculus nudus)
MiRBase ID
Paralogues
Orthologues Cte-Mir-2691  Efe-Mir-2691-P1  Efe-Mir-2691-P2  Efe-Mir-2691-P3  Efe-Mir-2691-P4  Pdu-Mir-2691-P1  Pdu-Mir-2691-P2a  Pdu-Mir-2691-P2b  Pdu-Mir-2691-P3  Pdu-Mir-2691-P4  Pdu-Mir-2691-P5-v1  Pdu-Mir-2691-P5-v2 
Node of Origin (locus) Sipuncula + Pleistoannelida
Node of Origin (family) Sipuncula + Pleistoannelida
Genome context
(GCA_026874595.1_ASM2687459v1_Sipunculus_nudus)		 CM049322.1: 38553907-38553967 [+]
Precursor
(pre-Mir +30nt flank)
UGUCGCCAAGUUCACAUGCGCAGGACAUCCGCCAGUGAGACUUUUGCAAAACCGUGUAAACAUCUAGGUUUUGCAAAGUAUCACAGCCGGGUGAUCUGUUGCCAUGACAACAGAUAUGAAA
Get precursor sequence
Structure
        10           20        30        40        50          
UGUCGCCAAGUUCACAU--  -|    A      CCA    G     U        GUGUAA 
                   GC GCAGG CAUCCG   GUGA ACUUU GCAAAACC      \
                   CG UGUCU GUGGGC   CACU UGAAA CGUUUUGG      A
AAAGUAUAGACAACAGUAC  U^    A      CGA    A     -        AUCUAC 
 .       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ph
Star sequence

Snu-Mir-2691_5p*
mirBase accessionNone
Sequence 
0- GCCAGUGAGACUUUUGCAAAACC -23
Get sequence
Mature sequence

Snu-Mir-2691_3p
mirBase accessionNone
Sequence 
38- UUUUGCAAAGUAUCACAGCCGGG -61
Get sequence