MirGeneDB 3.0
MirGeneDB ID

Pdu-Mir-2691-P2b

Family name MIR-2691 (all species)
Seed UUUUGCA
Species Dumerils clam worm (Platynereis dumerilii)
MiRBase ID
Paralogues Pdu-Mir-2691-P1  Pdu-Mir-2691-P2a  Pdu-Mir-2691-P3  Pdu-Mir-2691-P4  Pdu-Mir-2691-P5-v1  Pdu-Mir-2691-P5-v2 
Orthologues Cte-Mir-2691  Efe-Mir-2691-P2  Snu-Mir-2691 
Node of Origin (locus) P. dumerilii
Node of Origin (family) Sipuncula + Pleistoannelida
Genome context
(GCA_026936325.1_EMBL_pdum_1.0)		 JAPTHN010000297.1: 185455-185512 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCAUGGUUAUAAAAUCCGUUGCAGUGGUGUAGUGAUACUUUGCACAAAUCGUAAAGAAACAUCGGUUUUGCAUGGUAUCACUGCUCUGCAGCAAUGGACAACUUCGGAAGAGAAGG
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Structure
        10          20        30        40        50         
CUGCAUGGUUAUAAAAU--|      A UG U           U    C      UAAAG 
                   CCGUUGC G  G GUAGUGAUACU UGCA AAAUCG     \
                   GGUAACG C  C CGUCACUAUGG ACGU UUUGGC     A
GGAAGAGAAGGCUUCAACA^      A GU U           U    -      UACAA 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
24 24 24 24 24 36 36 36 36 36 48 48 48 48 48 6d 6d 6d 6d 72 72 72 72 72
Star sequence

Pdu-Mir-2691-P2b_5p*
mirBase accessionNone
Sequence 
0- GUAGUGAUACUUUGCACAAAUCG -23
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Mature sequence

Pdu-Mir-2691-P2b_3p
mirBase accessionNone
Sequence 
36- GUUUUGCAUGGUAUCACUGCUC -58
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