| MirGeneDB ID | Pdu-Mir-2691-P1 |
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| Family name |
MIR-2691 (all species) |
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| Seed |
ACGGUGA |
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| Species |
Dumerils clam worm (Platynereis dumerilii) |
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| MiRBase ID |
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| Paralogues |
Pdu-Mir-2691-P2a
Pdu-Mir-2691-P2b
Pdu-Mir-2691-P3
Pdu-Mir-2691-P4
Pdu-Mir-2691-P5-v1
Pdu-Mir-2691-P5-v2
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| Orthologues |
Cte-Mir-2691
Efe-Mir-2691-P1
Snu-Mir-2691
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| Node of Origin (locus) |
P. dumerilii
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| Node of Origin (family) |
Sipuncula + Pleistoannelida
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Genome context
(GCA_026936325.1_EMBL_pdum_1.0) |
JAPTHN010000004.1: 75689506-75689564 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGACGAUCUUCAAAUUUAGUCAGCGCCUAGGACGGUGAAACUUGUGCAAAACCUUACAUCCAGUUGGUUUUGCAAAGUAUCACAGCUUAAGGAACUGACCUCUUUCAUCGUGGAACUGC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GGACGAUCUUCAAAUUUA-- CG -| ACG A G UUACA
GUCAG CC UAGG GUGA ACUU UGCAAAACC U
CAGUC GG AUUC CACU UGAA ACGUUUUGG C
CGUCAAGGUGCUACUUUCUC AA A^ GA- A - UUGAC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| 24 |
24 |
24 |
24 |
24 |
36 |
36 |
36 |
36 |
36 |
48 |
48 |
48 |
48 |
48 |
6d |
6d |
6d |
6d |
72 |
72 |
72 |
72 |
72 |
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| Mature sequence |
Pdu-Mir-2691-P1_5p |
| mirBase accession | None |
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| Sequence |
0- GACGGUGAAACUUGUGCAAAACC -23
Get sequence
|
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| Star sequence |
Pdu-Mir-2691-P1_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- UUUUGCAAAGUAUCACAGCUUA -59
Get sequence
|
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