MirGeneDB 3.0

MirGeneDB ID

Efe-Mir-2691-P3

Family name MIR-2691 (all species)
Seed UUUGCAA
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-2691-P1  Efe-Mir-2691-P2  Efe-Mir-2691-P4 
Orthologues Cte-Mir-2691  Pdu-Mir-2691-P3  Snu-Mir-2691 
Node of Origin (locus) E. fetida
Node of Origin (family) Sipuncula + Pleistoannelida
Genome context
(Efe_combined)
Efet.01.299984: 674-735 [-]
Precursor
(pre-Mir +30nt flank)
GCGAUGUUUUCUGCCCGUGCGUUGGUGGCAGGCAGUGACAUUUCAUGCAAAGACCGUUACUUAAGAAGAGGUUUUGCAAAGUAUCACUGCUUACCACAGACGUUACUUUCGAGAACAGGAGU
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Structure
        10         20        30        40        50        60  
GCGAUGUUUUCUGCCCGU-|    G    C         C    CA     A    GUUACU 
                   GCGUU GUGG AGGCAGUGA AUUU  UGCAA GACC      U
                   UGCAG CACC UUCGUCACU UGAA  ACGUU UUGG      A
UGAGGACAAGAGCUUUCAU^    A    A         A    --     -    AGAAGA 
120       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
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To
Star sequence

Efe-Mir-2691-P3_5p*

mirBase accessionNone
Sequence
0- GGCAGUGACAUUUCAUGCAAAGACC -25
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Mature sequence

Efe-Mir-2691-P3_3p

mirBase accessionNone
Sequence
41- UUUUGCAAAGUAUCACUGCUU -62
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