MirGeneDB 2.1

MirGeneDB ID

Cte-Mir-22-P1

Family name MIR-22 (all species)
Seed GCUGCCU
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-745a
Paralogues Cte-Mir-22-P2 
Orthologues Aca-Mir-22-P1b  Ami-Mir-22-P1b  Bfl-Mir-22-o1a  Bfl-Mir-22-o1b  Bfl-Mir-22-o1c  Bfl-Mir-22-P1  Bla-Mir-22-o1a  Bla-Mir-22-o1b  Bla-Mir-22-o1c  Bla-Mir-22-P1  Bpl-Mir-22-P1  Bta-Mir-22-P1b  Cfa-Mir-22-P1b  Cgi-Mir-22-P1  Cli-Mir-22-P1b  Cmi-Mir-22-P1a  Cmi-Mir-22-P1b  Cpi-Mir-22-P1b  Cpo-Mir-22-P1b  Dno-Mir-22-P1b  Dre-Mir-22-P1a  Dre-Mir-22-P1b1  Dre-Mir-22-P1b2  Ebu-Mir-22-P1o1  Efe-Mir-22-P1c  Efe-Mir-22-P1d  Esc-Mir-22-P1  Ete-Mir-22-P1b  Gga-Mir-22-P1b  Gja-Mir-22-P1b  Gmo-Mir-22-P1a  Gmo-Mir-22-P1b1  Gmo-Mir-22-P1b2  Hsa-Mir-22-P1b  Lan-Mir-22-P1  Lch-Mir-22-P1a  Lch-Mir-22-P1b  Lgi-Mir-22-P1  Loc-Mir-22-P1a  Loc-Mir-22-P1b  Mal-Mir-22-P1a  Mal-Mir-22-P1b1  Mal-Mir-22-P1b2  Mdo-Mir-22-P1b  Mml-Mir-22-P1b  Mmu-Mir-22-P1b  Mun-Mir-22-P1b  Npo-Mir-22-P1  Oan-Mir-22-P1b  Obi-Mir-22-P1  Ocu-Mir-22-P1b  Ovu-Mir-22-P1  Pbv-Mir-22-P1b  Pfl-Mir-22-P1  Pma-Mir-22-P1o2  Pma-Mir-22-P1o3  Rno-Mir-22-P1b  Sha-Mir-22-P1b  Sme-Mir-22-P1  Spt-Mir-22-P1b  Sto-Mir-22-P1a  Sto-Mir-22-P1b  Tgu-Mir-22-P1b  Tni-Mir-22-P1a  Tni-Mir-22-P1b1  Tni-Mir-22-P1b2  Xbo-Mir-22-o1d  Xbo-Mir-22-o1e  Xla-Mir-22-P1b3  Xla-Mir-22-P1b4  Xtr-Mir-22-P1b 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Capitella_teleta_v1.0)
CAPTEscaffold_133: 228398-228455 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-22-P1)
Mir-22-P1 CAPTEscaffold_133: 228398-228455 [+] Ensembl
Mir-22-P2 CAPTEscaffold_133: 228627-228683 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGUGCUCACGUCUCCUGGUUGAGGACAGUACGGCUCUUUAUCUGGUAGACUUGUGCAAACGCCCCAAGCUGCCUGGUAAAGAGCUGUCUCGUCGCAACCCUUCUCAGCAGUUCGCGAU
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Structure
        10           20         30        40        50         
UGUGCUCACGUCUCCUG---|   AG   -  U             U     A    UGCAA 
                    GUUG  GAC AG ACGGCUCUUUAUC GGUAG CUUG     \
                    CAAC  CUG UC UGUCGAGAAAUGG CCGUC GAAC     A
UAGCGCUUGACGACUCUUCC^   G-   C  -             U     -    CCCGC 
      110       100         90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Cte-Mir-22-P1_5p*

mirBase accessionNone
Sequence
0- CGGCUCUUUAUCUGGUAGACUUG -23
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Mature sequence

Cte-Mir-22-P1_3p

mirBase accessionMIMAT0009545
Sequence
36- AGCUGCCUGGUAAAGAGCUGUC -58
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