MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-22-P1b2

Family name MIR-22 (all species)
Seed AGCUGCC
Species Zebrafish (Danio rerio)
MiRBase ID
Paralogues Dre-Mir-22-P1a  Dre-Mir-22-P1b1 
Orthologues Aca-Mir-22-P1b  Agr-Mir-22-P1  Ami-Mir-22-P1b  Bfl-Mir-22-P1  Bko-Mir-22-P1  Bla-Mir-22-P1  Bpl-Mir-22-P1  Bta-Mir-22-P1b  Cfa-Mir-22-P1b  Cja-Mir-22-P1b  Cli-Mir-22-P1b  Cmi-Mir-22-P1b  Cpi-Mir-22-P1b  Cpo-Mir-22-P1b  Cte-Mir-22-P1  Dno-Mir-22-P1b  Eba-Mir-22-P1  Eca-Mir-22-P1b  Egr-Mir-22-P1  Esc-Mir-22-P1  Ete-Mir-22-P1b  Gga-Mir-22-P1b  Gja-Mir-22-P1b  Gmo-Mir-22-P1b2  Gsa-Mir-22-P1  Hru-Mir-22-P1  Hsa-Mir-22-P1b  Laf-Mir-22-P1b  Lan-Mir-22-P1  Lch-Mir-22-P1b  Lgi-Mir-22-P1  Lhy-Mir-22-P1  Llo-Mir-22-P1  Loc-Mir-22-P1b  Mal-Mir-22-P1b2  Mdo-Mir-22-P1b  Mgi-Mir-22-P1  Mml-Mir-22-P1b  Mmr-Mir-22-P1b  Mmu-Mir-22-P1b  Mom-Mir-22-P1  Mun-Mir-22-P1b  Neu-Mir-22-P1b  Npo-Mir-22-P1  Oan-Mir-22-P1b  Obi-Mir-22-P1  Ocu-Mir-22-P1b  Ofu-Mir-22-P1  Ovu-Mir-22-P1  Pab-Mir-22-P1b  Pau-Mir-22-P1  Pbv-Mir-22-P1b  Pca-Mir-22-P1  Pcr-Mir-22-P1  Pdu-Mir-22-P1  Pfl-Mir-22-P1  Pve-Mir-22-P1  Rno-Mir-22-P1b  Rph-Mir-22-P1  Sha-Mir-22-P1b  Sma-Mir-22-P1  Sme-Mir-22-P1  Snu-Mir-22-P1  Spt-Mir-22-P1b  Sto-Mir-22-P1b  Tgu-Mir-22-P1b  Tni-Mir-22-P1b2  War-Mir-22-P1  Xtr-Mir-22-P1b 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(danRer11)		 chr21: 39267231-39267293 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGAAAGUGAAUAUUGGCUGACCUACCGUAGUUCUUCUCUGGCAAACUUUAUGACUCUGUCUUUACGCUAAAGCUGCCAGCUGAAGAACUGUUGUGGUCAGCUUUACCCAGCACGCAUCGUU
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Structure
        10           20        30         40        50        60 
GCUGAAAGUGAAUAUUG---|      U  CG         U-      AA     UGACUCUG 
                    GCUGACC AC  UAGUUCUUC  CUGGCA  CUUUA        \
                    CGACUGG UG  GUCAAGAAG  GACCGU  GAAAU        U
UUGCUACGCACGACCCAUUU^      -  UU         UC      C-     CGCAUUUC 
 120       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-22-P1b2_5p*
mirBase accessionNone
Sequence 
0- AGUUCUUCUCUGGCAAACUUUA -22
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Mature sequence

Dre-Mir-22-P1b2_3p
mirBase accessionNone
Sequence 
41- AAGCUGCCAGCUGAAGAACUGU -63
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