MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-22-P1o3

Family name MIR-22 (all species)
Seed AGCUGCC
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-22a
Paralogues Pma-Mir-22-P1o2 
Orthologues Agr-Mir-22-P1  Bfl-Mir-22-P1  Bko-Mir-22-P1  Bla-Mir-22-P1  Bpl-Mir-22-P1  Cte-Mir-22-P1  Eba-Mir-22-P1  Egr-Mir-22-P1  Esc-Mir-22-P1  Gsa-Mir-22-P1  Hru-Mir-22-P1  Lan-Mir-22-P1  Lgi-Mir-22-P1  Lhy-Mir-22-P1  Llo-Mir-22-P1  Mgi-Mir-22-P1  Mom-Mir-22-P1  Npo-Mir-22-P1  Obi-Mir-22-P1  Ofu-Mir-22-P1  Ovu-Mir-22-P1  Pau-Mir-22-P1  Pca-Mir-22-P1  Pcr-Mir-22-P1  Pdu-Mir-22-P1  Pfl-Mir-22-P1  Pve-Mir-22-P1  Rph-Mir-22-P1  Sma-Mir-22-P1  Sme-Mir-22-P1  Snu-Mir-22-P1  War-Mir-22-P1 
Node of Origin (locus) P. marinus
Node of Origin (family) Bilateria
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046073.1: 16942602-16942664 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGUCGCUCGUCCCCCUGGCCGCCCCACUGCAGCCCUUCGCUGGCCAGCUUUAGUUCCGGCCGAGGCGAGUAAAGCUGCCAGUUGAAGAGCUAUAGUGGGCGGCCACGCUCAACUCGACGCGCG
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Structure
        10           20        30         40        50        60 
CGUCGCUCGUCCCCCUG---|      C    C   C     -     C       GUUCCGGC 
                    GCCGCCC ACUG AGC CUUCG CUGGC AGCUUUA        \
                    CGGCGGG UGAU UCG GAAGU GACCG UCGAAAU        C
GCGCGCAGCUCAACUCGCAC^      -    A   A     U     -       GAGCGGAG 
 120       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Gi Gu He Ki La Li Mo Mu Sk
Star sequence

Pma-Mir-22-P1o3_5p* (predicted)
mirBase accessionMIMAT0019398
Sequence 
0- AGCCCUUCGCUGGCCAGCUUUA -22
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Mature sequence

Pma-Mir-22-P1o3_3p
mirBase accessionMIMAT0019399
Sequence 
41- AAGCUGCCAGUUGAAGAGCUAU -63
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