MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-22-P1o2

Family name MIR-22 (all species)
Seed AGCUGCC
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-22b
Paralogues Pma-Mir-22-P1o3 
Orthologues Agr-Mir-22-P1  Bfl-Mir-22-P1  Bko-Mir-22-P1  Bla-Mir-22-P1  Bpl-Mir-22-P1  Cte-Mir-22-P1  Eba-Mir-22-P1  Egr-Mir-22-P1  Esc-Mir-22-P1  Gsa-Mir-22-P1  Hru-Mir-22-P1  Lan-Mir-22-P1  Lgi-Mir-22-P1  Lhy-Mir-22-P1  Llo-Mir-22-P1  Mgi-Mir-22-P1  Mom-Mir-22-P1  Npo-Mir-22-P1  Obi-Mir-22-P1  Ofu-Mir-22-P1  Ovu-Mir-22-P1  Pau-Mir-22-P1  Pca-Mir-22-P1  Pcr-Mir-22-P1  Pdu-Mir-22-P1  Pfl-Mir-22-P1  Pve-Mir-22-P1  Rph-Mir-22-P1  Sma-Mir-22-P1  Sme-Mir-22-P1  Snu-Mir-22-P1  War-Mir-22-P1 
Node of Origin (locus) P. marinus
Node of Origin (family) Bilateria
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046106.1: 10906046-10906112 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGCCGCGCGCUCUCUGGCCGUGCUACACGCGCUCUCCACCGGCAGGUCUUUACGUCGCUUCUCUCGAGAGCCUAAAGCUGCCAGUUGAAGAGCUGAGGUCGCCGGUCUCUCUCUGCACGCGUGGUG
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Structure
        10           20        30         40        50        60   
CCGCCGCGCGCUCUCUG---|   U  U  ACGC     - C  C     GU     CGUCGCUUC 
                    GCCG GC AC    GCUCU C AC GGCAG  CUUUA         U
                    UGGC CG UG    CGAGA G UG CCGUC  GAAAU         C
GUGGUGCGCACGUCUCUCUC^   -  C  GAGU     A U  A     --     CCGAGAGCU 
     120       110        100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Gi Gu He Ki La Li Mo Mu Sk
Star sequence

Pma-Mir-22-P1o2_5p*
mirBase accessionMIMAT0019400
Sequence 
0- CGCUCUCCACCGGCAGGUCUUUA -23
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Mature sequence

Pma-Mir-22-P1o2_3p
mirBase accessionMIMAT0019401
Sequence 
45- AAGCUGCCAGUUGAAGAGCUGA -67
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