MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-22-P1c

Family name MIR-22 (all species)
Seed GCUGCCU
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-22-P1d 
Orthologues Agr-Mir-22-P1  Bfl-Mir-22-P1  Bko-Mir-22-P1  Bla-Mir-22-P1  Bpl-Mir-22-P1  Cte-Mir-22-P1  Eba-Mir-22-P1  Egr-Mir-22-P1  Esc-Mir-22-P1  Gsa-Mir-22-P1  Hru-Mir-22-P1  Lan-Mir-22-P1  Lgi-Mir-22-P1  Lhy-Mir-22-P1  Llo-Mir-22-P1  Mgi-Mir-22-P1  Mom-Mir-22-P1  Npo-Mir-22-P1  Obi-Mir-22-P1  Ofu-Mir-22-P1  Ovu-Mir-22-P1  Pau-Mir-22-P1  Pca-Mir-22-P1  Pcr-Mir-22-P1  Pdu-Mir-22-P1  Pfl-Mir-22-P1  Pve-Mir-22-P1  Rph-Mir-22-P1  Sma-Mir-22-P1  Sme-Mir-22-P1  Snu-Mir-22-P1  War-Mir-22-P1 
Node of Origin (locus) E. fetida
Node of Origin (family) Bilateria
Genome context
(Efe_combined)		 Efet.01.45172: 3574-3634 [-]
Precursor
(pre-Mir +30nt flank)
CAACAUGGAUCGAGGAGCGUCAACACGGAUCGACUCUCAAUCGGGCAACAUUGGUCUAUUGAACAACAAGCUGCCUGAUUAAGAGUUACGUCUGUGUUGGCGCCAACAUGCCUCGAAUCCU
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Structure
        10          20        30         40        50          
CAACAUGGAUCGAGGAG--             C-|     C         ACA   GUCUAU 
                   CGUCAACACGGAU  GACUCU AAUCGGGCA   UUG      \
                   GCGGUUGUGUCUG  UUGAGA UUAGUCCGU   AAC      U
UCCUAAGCUCCGUACAACC             CA^     A         CG-   AACAAG 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Efe-Mir-22-P1c_5p*
mirBase accessionNone
Sequence 
0- CGACUCUCAAUCGGGCAACAUUG -23
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Mature sequence

Efe-Mir-22-P1c_3p
mirBase accessionNone
Sequence 
38- AGCUGCCUGAUUAAGAGUUACGU -61
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