| MirGeneDB ID | Cte-Mir-2716 |
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| Family name |
MIR-2716 (all species) |
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| Seed |
AGAGAUG |
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| Species |
Polychaete worm (Capitella teleta) |
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| MiRBase ID |
cte-mir-2716
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. teleta
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| Node of Origin (family) |
C. teleta
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Genome context
(Capitella_teleta_v1.0) |
CAPTEscaffold_824: 60226-60296 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAGACACGCUUGUGACGCAGGUUGUGACCCUGAUCUUCCCAGCAUACCUCAUGAAGUCAACAAUCGACAAAUAACCAGUGAGAGAUGUCGGGAAGGUCACGGAGAUGACUCUGCCUGUCACCGGGAUAAUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GAGACACGCUUGUGACG- -| UG GA C A AC GAAGUCAACAAU
CAG GU U CC UGAUCUUCCC GCAU CUCAU \
GUC CA A GG ACUGGAAGGG UGUA GAGUG C
UUAAUAGGGCCACUGUCC U^ GU GA C C GA ACCAAUAAACAG
. 120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Cte-Mir-2716_5p* |
| mirBase accession | None |
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| Sequence |
0- UGAUCUUCCCAGCAUACCUCAU -22
Get sequence
|
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| Mature sequence |
Cte-Mir-2716_3p |
| mirBase accession | MIMAT0013585 |
|---|
| Sequence |
49- GAGAGAUGUCGGGAAGGUCACG -71
Get sequence
|
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