MirGeneDB 2.1
MirGeneDB ID

Cte-Mir-87-P2

Family name MIR-87 (all species)
Seed UGAGCAA
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-87a
Paralogues Cte-Mir-87-P1 
Orthologues Aae-Mir-87-P2  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Cbr-Mir-87-o2  Cel-Mir-87-o2  Cgi-Mir-87-P2  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Dan-Mir-87-P2-v1  Dan-Mir-87-P2-v2  Dme-Mir-87-P2-v1  Dme-Mir-87-P2-v2  Dmo-Mir-87-P2-v1  Dmo-Mir-87-P2-v2  Dsi-Mir-87-P2-v1  Dsi-Mir-87-P2-v2  Dya-Mir-87-P2-v1  Dya-Mir-87-P2-v2  Hme-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Tca-Mir-87-P2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Capitella_teleta_v1.0)		 CAPTEscaffold_222: 219067-219151 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-87-P2)		 Mir-87-P2 CAPTEscaffold_222: 219067-219151 [-] Ensembl
Mir-87-P1 CAPTEscaffold_222: 219605-219665 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUGGCUUUAGCGAGCGACAGUUCUUCAACGACGCCUGAAUUUUUGUCUCAGCCAAACGAUUAAAGAAAAUAGUUCCCUCCGCGGAGGGAUCUGGUGAGCAAAGUUUCAGGUGUGCUUGCGGACUGCACUGCCUUCUAAUGCGUUU
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Structure
        10           20        30        40        50        60        70   
GUGGCUUUAGCGAGCGA---|     UU   CG         U     U    G   AACGAUUAAAGAAAAUAG 
                    CAGUUC  CAA  ACGCCUGAA UUUUG CUCA CCA                  \
                    GUCAGG  GUU  UGUGGACUU GAAAC GAGU GGU                  U
UUUGCGUAAUCUUCCGUCAC^     C-   CG         U     -    -   CUAGGGAGGCGCCUCCCU 
   140       130       120        110       100          90        80
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cte-Mir-87-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACGCCUGAAUUUUUGUCUCAGCCA -24
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Mature sequence

Cte-Mir-87-P2_3p
mirBase accessionMIMAT0009518
Sequence 
63- GUGAGCAAAGUUUCAGGUGUGC -85
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