MirGeneDB 3.0
MirGeneDB ID

Aga-Mir-87-P2

Family name MIR-87 (all species)
Seed UGAGCAA
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID aga-mir-87
Paralogues
Orthologues Aae-Mir-87-P2  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Cbr-Mir-87-o2  Cel-Mir-87-o2  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dan-Mir-87-P2-v2  Dgr-Mir-87-P2  Dlo-Mir-87-P2  Dme-Mir-87-P2-v1  Dme-Mir-87-P2-v2  Dmo-Mir-87-P2-v1  Dmo-Mir-87-P2-v2  Dsi-Mir-87-P2-v1  Dsi-Mir-87-P2-v2  Dya-Mir-87-P2-v1  Dya-Mir-87-P2-v2  Gpa-Mir-87-P2-v1  Gpa-Mir-87-P2-v2  Gsp-Mir-87  Hme-Mir-87-P2  Hru-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Mgi-Mir-87-P2  Ofu-Mir-87-P2  Pau-Mir-87-P2  Pve-Mir-87-P2  Sne-Mir-87  Snu-Mir-87-P2  Tca-Mir-87-P2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)		 NC_064600.1: 288422-288486 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CCUUUCCAAUGCAUAACGAUUUCUCUCGGCCCAGCCUGAAAUUUGCUAAACCUGAUACGUGUUCGAAACCAAGGUGAGCAAAUAUUCAGGUGUGUCGACGAGCGGUCACAUUCGUCGCUCCUCCU
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Structure
        10         20         30        40         50        60  
CCUUUCCAAUGCAUAAC-   UU   -|    CCA       -       AA    GAUACGUG 
                  GAU  CUC UCGGC   GCCUGAA AUUUGCU  ACCU        U
                  CUG  GAG AGCUG   UGGACUU UAAACGA  UGGA        U
UCCUCCUCGCUGCUUACA   GC   C^    UG-       A       G-    ACCAAAGC 
   120       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ab Ab He He Mi Mi Ov Ov Ov
Star sequence

Aga-Mir-87-P2_5p*
mirBase accessionNone
Sequence 
0- CCAGCCUGAAAUUUGCUAAACCU -23
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Mature sequence

Aga-Mir-87-P2_3p
mirBase accessionMIMAT0007858
Sequence 
43- GUGAGCAAAUAUUCAGGUGUGU -65
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