MirGeneDB 3.0
MirGeneDB ID

Snu-Mir-87-P2

Family name MIR-87 (all species)
Seed UGAGCAA
Species Peanut worm (Sipunculus nudus)
MiRBase ID
Paralogues Snu-Mir-87-P1 
Orthologues Aae-Mir-87-P2  Aga-Mir-87-P2  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Cbr-Mir-87-o2  Cel-Mir-87-o2  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dan-Mir-87-P2-v2  Dgr-Mir-87-P2  Dlo-Mir-87-P2  Dme-Mir-87-P2-v1  Dme-Mir-87-P2-v2  Dmo-Mir-87-P2-v1  Dmo-Mir-87-P2-v2  Dsi-Mir-87-P2-v1  Dsi-Mir-87-P2-v2  Dya-Mir-87-P2-v1  Dya-Mir-87-P2-v2  Gpa-Mir-87-P2-v1  Gpa-Mir-87-P2-v2  Gsp-Mir-87  Hme-Mir-87-P2  Hru-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Mgi-Mir-87-P2  Ofu-Mir-87-P2  Pau-Mir-87-P2  Pve-Mir-87-P2  Sne-Mir-87  Tca-Mir-87-P2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCA_026874595.1_ASM2687459v1_Sipunculus_nudus)		 CM049318.1: 65882627-65882686 [+]
Precursor
(pre-Mir +30nt flank)
UGCAUCAUGGGAUAGAACCACGUUCCUGACCAGCCUGAUCCUUCUGCUCAGACCUGUAUGUUAUAUAGGUGAGCAAAGUUUCAGGUGUGUCAAGGUCGUGGAAAAUCAGCAAUUAUUUAA
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Structure
        10          20         30        40        50        60 
UGCAUCAUGGGAUAGAA--|    UU   -   CA      UC   C     AG    GUAUG 
                   CCACG  CCU GAC  GCCUGA  CUU UGCUC  ACCU     \
                   GGUGC  GGA CUG  UGGACU  GAA ACGAG  UGGA     U
AAUUUAUUAACGACUAAAA^    U-   A   UG      UU   -     --    UAUAU 
.       110       100         90        80           70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Snu-Mir-87-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- CAGCCUGAUCCUUCUGCUCAGACCU -25
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Mature sequence

Snu-Mir-87-P2_3p
mirBase accessionNone
Sequence 
38- GUGAGCAAAGUUUCAGGUGUGU -60
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