MirGeneDB 2.1
MirGeneDB ID

Dmo-Mir-87-P2-v2

Family name MIR-87 (all species)
Seed GAGCAAA
Species Fruit fly (Drosophila mojavensis)
MiRBase ID dmo-mir-87
Paralogues Dmo-Mir-87-P2-v1 
Orthologues Aae-Mir-87-P2  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Cbr-Mir-87-o2  Cel-Mir-87-o2  Cgi-Mir-87-P2  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dan-Mir-87-P2-v2  Dme-Mir-87-P2-v1  Dme-Mir-87-P2-v2  Dsi-Mir-87-P2-v1  Dsi-Mir-87-P2-v2  Dya-Mir-87-P2-v1  Dya-Mir-87-P2-v2  Hme-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Tca-Mir-87-P2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Dmoj_caf1)		 scaffold_6500: 14729884-14729956 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-87-P2-v2)		 Mir-87-P2-v1 scaffold_6500: 14729884-14729956 [-] Ensembl
Mir-87-P2-v2 scaffold_6500: 14729884-14729956 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGGGAGCUAUCCUUAGCCGGCAUCUUUCAUUCGCGCCUGUAUCUUGCUGAACCGUUACAAUUGUCACAUCCAAAUCCGGUUGAGCAAAAUUUCAGGUGUGUGAGAAAUUUGUAGCGGUCUCAUCAAAGCAAAG
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Structure
        10          20        30        40         50        60     
UGGGAGCUAUCCUUAGCCG--   UC    AUU        U-| C     G   CGUUACAAUUGU 
                     GCA  UUUC   CGCGCCUG  AU UUGCU AAC            C
                     UGU  AAAG   GUGUGGAC  UA AACGA UUG            A
GAAACGAAACUACUCUGGCGA   UU    AGU        UU^ A     G   GCCUAAACCUAC 
 130       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Em Fe Ma Ma
Star sequence

Dmo-Mir-87-P2-v2_5p*
mirBase accessionNone
Sequence 
0- UCGCGCCUGUAUCUUGCUGAAC -22
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Mature sequence

Dmo-Mir-87-P2-v2_3p
mirBase accessionMIMAT0008662
Sequence 
50- UGAGCAAAAUUUCAGGUGUGUGA -73
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