MirGeneDB 2.1
MirGeneDB ID

Dsi-Mir-87-P2-v2

Family name MIR-87 (all species)
Seed GAGCAAA
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-87
Paralogues Dsi-Mir-87-P2-v1 
Orthologues Aae-Mir-87-P2  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Cbr-Mir-87-o2  Cel-Mir-87-o2  Cgi-Mir-87-P2  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dan-Mir-87-P2-v2  Dme-Mir-87-P2-v1  Dme-Mir-87-P2-v2  Dmo-Mir-87-P2-v1  Dmo-Mir-87-P2-v2  Dya-Mir-87-P2-v1  Dya-Mir-87-P2-v2  Hme-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Tca-Mir-87-P2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 2L: 9648332-9648403 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-87-P2-v2)		 Mir-87-P2-v1 2L: 9648332-9648403 [-] UCSC Ensembl
Mir-87-P2-v2 2L: 9648332-9648403 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACACUUAAGUCCUUUGGCGGCACAUUUCAUUCGCGCCUGUAUCUUGCUGAACCGCUGCCAUCAUGGCCAACGAUCCGGUUGAGCAAAAUUUCAGGUGUGUGAGAAAUGUGUUUAGCAUUCAUCGGAGGAUUU
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Structure
        10          20        30        40         50        60     
ACACUUAAGUCCUUUGGC--          AUU        U-| C     G   CGCUGCCAUCAU 
                    GGCACAUUUC   CGCGCCUG  AU UUGCU AAC            \
                    UUGUGUAAAG   GUGUGGAC  UA AACGA UUG            G
UUUAGGAGGCUACUUACGAU          AGU        UU^ A     G   GCCUAGCAACCG 
130       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Wh
Star sequence

Dsi-Mir-87-P2-v2_5p*
mirBase accessionNone
Sequence 
0- UCGCGCCUGUAUCUUGCUGAAC -22
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Mature sequence

Dsi-Mir-87-P2-v2_3p
mirBase accessionMIMAT0008844
Sequence 
49- UGAGCAAAAUUUCAGGUGUGUGA -72
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