MirGeneDB 3.0
MirGeneDB ID

Sne-Mir-87

Family name MIR-87 (all species)
Seed UGAGCAA
Species Seison (Seison nebaliae)
MiRBase ID
Paralogues
Orthologues Aae-Mir-87-P2  Aga-Mir-87-P2  Agr-Mir-87-o29  Asu-Mir-87-o3  Asu-Mir-87-o4  Ava-Mir-87-o34  Ava-Mir-87-o35  Bge-Mir-87-P1  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Bko-Mir-87-o7  Bpl-Mir-87-o7  Cbr-Mir-87-o1  Cbr-Mir-87-o2  Cel-Mir-87-o1  Cel-Mir-87-o2  Csc-Mir-87-P1k1  Csc-Mir-87-P1k2  Csc-Mir-87-P1l  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Cte-Mir-87-P1  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dan-Mir-87-P2-v2  Dgr-Mir-87-o30  Dgr-Mir-87-o31  Dgr-Mir-87-P1  Dgr-Mir-87-P2  Dlo-Mir-87-P1  Dlo-Mir-87-P2  Dma-Mir-87-o5a  Dma-Mir-87-o5b  Dme-Mir-87-P2-v1  Dme-Mir-87-P2-v2  Dmo-Mir-87-P2-v1  Dmo-Mir-87-P2-v2  Dpu-Mir-87-o5a  Dpu-Mir-87-o5b  Dsi-Mir-87-P2-v1  Dsi-Mir-87-P2-v2  Dya-Mir-87-P2-v1  Dya-Mir-87-P2-v2  Eba-Mir-87-o29  Efe-Mir-87-o12  Efe-Mir-87-o13  Efe-Mir-87-o14  Efe-Mir-87-o15  Efe-Mir-87-o16  Efe-Mir-87-o17  Efe-Mir-87-o18  Egr-Mir-87-o28  Esc-Mir-87-o6  Gpa-Mir-87-P2-v1  Gpa-Mir-87-P2-v2  Gsa-Mir-87-o42  Gsp-Mir-87  Hme-Mir-87-P2  Hru-Mir-87-P1  Hru-Mir-87-P2  Isc-Mir-87-P1  Isc-Mir-87-P2  Lan-Mir-87-P1  Lan-Mir-87-P2  Lgi-Mir-87-P1  Llo-Mir-87-o24  Llo-Mir-87-o25  Llo-Mir-87-o26  Lpo-Mir-87-P1c  Lpo-Mir-87-P1d  Lpo-Mir-87-P1e  Lpo-Mir-87-P1f  Lpo-Mir-87-P1g  Lpo-Mir-87-P1h  Lpo-Mir-87-P1i  Lpo-Mir-87-P1j  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Mgi-Mir-87-P1  Mgi-Mir-87-P2  Mom-Mir-87-o29  Obi-Mir-87-o6  Ofu-Mir-87-P1  Ofu-Mir-87-P2  Ovu-Mir-87-o6  Pau-Mir-87-P1  Pau-Mir-87-P2  Pca-Mir-87-o22  Pca-Mir-87-o23  Pcr-Mir-87-o36  Pcr-Mir-87-o37  Pdu-Mir-87-o33  Pve-Mir-87-P1  Pve-Mir-87-P2  Rph-Mir-87-o19  Rph-Mir-87-o20  Rph-Mir-87-o21  Sma-Mir-87-o32  Sme-Mir-87-o8  Sme-Mir-87-o9  Sme-Mir-87-o10  Sme-Mir-87-o11  Snu-Mir-87-P1  Snu-Mir-87-P2  Tca-Mir-87-P1  Tca-Mir-87-P2  Tur-Mir-87-o38  Tur-Mir-87-o39  Tur-Mir-87-o40  Tur-Mir-87-o41  War-Mir-87-o29 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(S.nebaliae-strainB-GA2.2-3295Contigs_manual)		 k141_1231: 19330-19461 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUAAUAUUAACACAAACGGAUAUGGUAUAUACCUGAAACAUGGCUGGAACCUUUGAAGUUGUCCCGAUGGAUUUAUCCAUUAAAUUUCUUUCACGUUCGAAAGCUUUUUAAUUGAUAAACUCUCCGUCCUUUUAAUUAGGUGAGCAAAGUUUCAGGUGUGUACUAUACUUACCGUCAUUCCCCAUCACCCU
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Structure
        10        20           30        40        50        60        70        80        90      
AUUAAUAUUAACACAAAC  A---|                  AUG   GGA    UUGAAGUUGUCCCGAUGGAUUUAUCCAUUAAAUUUCUUUCAC 
                  GG    UAUGGUAUAUACCUGAAAC   GCU   ACCU                                          \
                  CC    AUAUCAUGUGUGGACUUUG   CGA   UGGA                                          G
UCCCACUACCCCUUACUG  AUUC^                  AAA   G--    UUAAUUUUCCUGCCUCUCAAAUAGUUAAUUUUUCGAAAGCUU 
190       180       170       160       150         140       130       120       110       100
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Po
Star sequence

Sne-Mir-87_5p*
mirBase accessionNone
Sequence 
0- UACCUGAAACAUGGCUGGAACCU -23
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Mature sequence

Sne-Mir-87_3p
mirBase accessionNone
Sequence 
110- GUGAGCAAAGUUUCAGGUGUGU -132
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