MirGeneDB 3.0
MirGeneDB ID

Dlo-Mir-87-P1

Family name MIR-87 (all species)
Seed UGAGCAA
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues Dlo-Mir-87-P2 
Orthologues Bge-Mir-87-P1  Cbr-Mir-87-o1  Cel-Mir-87-o1  Csc-Mir-87-P1k1  Csc-Mir-87-P1k2  Csc-Mir-87-P1l  Cte-Mir-87-P1  Dgr-Mir-87-P1  Gsp-Mir-87  Hru-Mir-87-P1  Isc-Mir-87-P1  Lan-Mir-87-P1  Lgi-Mir-87-P1  Lpo-Mir-87-P1c  Lpo-Mir-87-P1d  Lpo-Mir-87-P1e  Lpo-Mir-87-P1f  Lpo-Mir-87-P1g  Lpo-Mir-87-P1h  Lpo-Mir-87-P1i  Lpo-Mir-87-P1j  Mgi-Mir-87-P1  Ofu-Mir-87-P1  Pau-Mir-87-P1  Pve-Mir-87-P1  Sne-Mir-87  Snu-Mir-87-P1  Tca-Mir-87-P1 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)		 NC_087234.1: 6740344-6740408 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAAGAAUGAUGUUUUGAGUGCCACGAACGUGCCUGACUCCUUGCUCCUACCCGUGUAUUUUAAAAUUCUGGGUGAGCAAAGUUUCAGGUGUGUUUGUGACACUUAAUGUCAGCUGUAACAUGA
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Structure
        10          20        30        40        50        60   
AAGAAGAAUGAUGUUUU--|    C        UG     CUCC      CU    GUGUAUUU 
                   GAGUG CACGAACG  CCUGA    UUGCUC  ACCC        \
                   UUCAC GUGUUUGU  GGACU    AACGAG  UGGG        U
AGUACAAUGUCGACUGUAA^    A        GU     UUGA      --    UCUUAAAA 
   120       110       100        90        80          70
Deep sequencing
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CommentThere appears to be a second Drosha cut -1 on the 3p arm.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Sr Sr
Star sequence

Dlo-Mir-87-P1_5p*
mirBase accessionNone
Sequence 
0- GUGCCUGACUCCUUGCUCCUACCC -24
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Mature sequence

Dlo-Mir-87-P1_3p
mirBase accessionNone
Sequence 
43- GUGAGCAAAGUUUCAGGUGUGU -65
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