MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-87-o1

Family name MIR-87 (all species)
Seed UGAGCAA
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-87
Paralogues Cel-Mir-87-o2 
Orthologues Bge-Mir-87-P1  Cbr-Mir-87-o1  Csc-Mir-87-P1k1  Csc-Mir-87-P1k2  Csc-Mir-87-P1l  Cte-Mir-87-P1  Dgr-Mir-87-P1  Dlo-Mir-87-P1  Gsp-Mir-87  Hru-Mir-87-P1  Isc-Mir-87-P1  Lan-Mir-87-P1  Lgi-Mir-87-P1  Lpo-Mir-87-P1c  Lpo-Mir-87-P1d  Lpo-Mir-87-P1e  Lpo-Mir-87-P1f  Lpo-Mir-87-P1g  Lpo-Mir-87-P1h  Lpo-Mir-87-P1i  Lpo-Mir-87-P1j  Mgi-Mir-87-P1  Ofu-Mir-87-P1  Pau-Mir-87-P1  Pve-Mir-87-P1  Sne-Mir-87  Snu-Mir-87-P1  Tca-Mir-87-P1 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Protostomia
Genome context
(ce11)		 chrV: 12038700-12038765 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCAUCCUCAACACAGGUUGUGCCAUCCGGCCGCCUGAUACUUUCGUCUCAACCUCGCUGUCAGAUUGGUCGUAGGUGAGCAAAGUUUCAGGUGUGCCGGAACACACCCAUACUUUGCCUAAUUGGU
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Structure
        10            20        30         40        50        60   
UCAUCCUCAACACAGGU----|   CCA      -       U     C U    A   CGCUGUCA 
                     UGUG   UCCGGC CGCCUGA ACUUU G CUCA CCU        G
                     ACAC   AGGCCG GUGGACU UGAAA C GAGU GGA        A
UGGUUAAUCCGUUUCAUACCC^   A--      U       U     - -    -   UGCUGGUU 
    120       110         100        90         80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-87-o1_5p*
mirBase accessionMIMAT0020325
Sequence 
0- CGCCUGAUACUUUCGUCUCAACCU -24
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Mature sequence

Cel-Mir-87-o1_3p
mirBase accessionMIMAT0000060
Sequence 
44- GUGAGCAAAGUUUCAGGUGUGC -66
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Proposed targets microrna.org: MIMAT0000060
TargetScanWorm: cel-miR-87